RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TRPM8Q7Z2W7 1104 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
DDX39A-217ENST00000592391 LRRC75AQ8NAA5 344 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 SYT14Q8NB59 555 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 NANOS1Q8WY41 292 aaKnown RBP12.63□□□□□ -0.39
DDX39A-217ENST00000592391 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 GTPBP3Q969Y2 492 aaKnown RBP12.63□□□□□ -0.39
DDX39A-217ENST00000592391 TNFRSF13CQ96RJ3 184 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 FUZQ9BT04 418 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 C1orf21Q9H246 121 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 MUC13Q9H3R2 512 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 IL1RAPQ9NPH3 570 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 PRPF19Q9UMS4 504 aaKnown RBP12.63□□□□□ -0.39
DDX39A-217ENST00000592391 ARID1AO14497 2285 aa12.63□□□□□ -0.39
DDX39A-217ENST00000592391 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ENTPD5O75356 428 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 FABP3P05413 133 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 CELA3BP08861 270 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 CD79AP11912 226 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ATP6V1B2P21281 511 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 LIMS1P48059 325 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 FABP6P51161 128 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ATP5J2P56134 94 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 SMIM11AP58511 58 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 CTXN1P60606 82 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 NPRL3Q12980 569 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 TOP3AQ13472 1001 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 SEC23BQ15437 767 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 MTX3Q5HYI7 312 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 FAM205BPQ63HN1 556 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 CYP2R1Q6VVX0 501 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 IGFN1Q86VF2 1251 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 MUC15Q8N387 334 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 OR52J3Q8NH60 311 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 HDAC2Q92769 488 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 FAM46AQ96IP4 442 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 DENND2DQ9H6A0 471 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 SEC61A2Q9H9S3 476 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 NOX3Q9HBY0 568 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 KRCC1Q9NPI7 259 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 TAS2R1Q9NYW7 299 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF224Q9NZL3 707 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF346Q9UL40 294 aaKnown RBP12.62□□□□□ -0.39
DDX39A-217ENST00000592391 PLCE1Q9P212 2302 aa12.62□□□□□ -0.39
DDX39A-217ENST00000592391 USF3Q68DE3 2245 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 SH3PXD2BA1X283 911 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 PDE5AO76074 875 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 UBL3O95164 117 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 GADD45GO95257 159 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 NR2C1P13056 603 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 CALCRP30988 508 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 APOBEC3AP31941 199 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-217ENST00000592391 CDKN1AP38936 164 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 OMPP47874 163 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF84P51523 738 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 SPIBQ01892 262 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 PIGFQ07326 219 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 TRIM25Q14258 630 aaKnown RBP12.61□□□□□ -0.39
DDX39A-217ENST00000592391 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 ZBED5Q49AG3 693 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 C11orf71Q6IPW1 123 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 LCN8Q6JVE9 175 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-217ENST00000592391 ZDHHC21Q8IVQ6 265 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
DDX39A-217ENST00000592391 ALG12Q9BV10 488 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 NDEL1Q9GZM8 345 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 SMURF2Q9HAU4 748 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 DLL4Q9NR61 685 aa12.61□□□□□ -0.39
DDX39A-217ENST00000592391 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 IGHV2OR16-5A0A0B4J2B6 119 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 TCRBV5S2A0A599 114 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 A6NIZ1 184 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 PTP4A3O75365 173 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
DDX39A-217ENST00000592391 SLC2A10O95528 541 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 RAB36O95755 333 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 CD14P08571 375 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF14P17017 642 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-217ENST00000592391 ZNF26P17031 533 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-217ENST00000592391 RPL4P36578 427 aaKnown RBP12.6□□□□□ -0.39
DDX39A-217ENST00000592391 ACVR1BP36896 505 aa12.6□□□□□ -0.39
DDX39A-217ENST00000592391 GIPRP48546 466 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms