RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ARMC1Q9NVT9 282 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CMTM6Q9NX76 183 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 SLC25A37Q9NYZ2 338 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 ENOPH1Q9UHY7 261 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 MOKQ9UQ07 419 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 FAM32AQ9Y421 112 aaKnown RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 AP4S1Q9Y587 144 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 AGAP5A6NIR3 686 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 ATP6V1G2-DDX39BF2Z307 99 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 ACOT8O14734 319 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 ARPC2O15144 300 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TGFAP01135 160 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 DBIP07108 87 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 HOXB9P17482 250 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 CDH2P19022 906 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TCN1P20061 433 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 FASP25445 335 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TACR3P29371 465 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 KDELR2P33947 212 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 HSPA13P48723 471 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 SH3BGRP55822 239 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 SCARB2Q14108 478 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 KPNB1Q14974 876 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 C3orf36Q3SXR2 165 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 GTDC1Q4AE62 458 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 RABL3Q5HYI8 236 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 SLC35F1Q5T1Q4 408 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TSPO2Q5TGU0 170 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 FRRS1Q6ZNA5 592 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 LRRC74BQ6ZQY2 392 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 GPAT4Q86UL3 456 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 RNF130Q86XS8 419 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 ARMC8Q8IUR7 673 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 LINC00471Q8N535 108 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 OR4F15Q8NGB8 312 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 OR9K2Q8NGE7 335 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 PNPT1Q8TCS8 783 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 WDR60Q8WVS4 1066 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 SLC38A2Q96QD8 506 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 C19orf24Q9BVV8 132 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 POLR2J2Q9GZM3 115 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 POLR2J3Q9H1A7 115 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 DCAF13Q9NV06 445 aaKnown RBP8.22□□□□□ -1.09
BRCA1-226ENST00000591534 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
BRCA1-226ENST00000591534 TCRBV3S1A0A5B6 114 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 TMEM72A0PK05 275 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 AQP7P3A6NL99 342 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CLDN24A6NM45 220 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 A8MVM7 634 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 VWC2LB2RUY7 222 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 HMGN4O00479 90 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 KRT36O76013 467 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 SCG5P05408 212 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF23P17027 643 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 GTF2E2P29084 291 aaKnown RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 PPOXP50336 477 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 IDH3GP51553 393 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CHN2P52757 468 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 SLC34A1Q06495 639 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 OR7A5Q15622 319 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 MAPK11Q15759 364 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 EFNB3Q15768 340 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 KRTAP24-1Q3LI83 254 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 RFLNBQ8N5W9 214 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 IL17RDQ8NFM7 739 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 MAGEE2Q8TD90 523 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 NEU4Q8WWR8 484 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 GEMIN6Q8WXD5 167 aaKnown RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CNOT9Q92600 299 aaKnown RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 C3orf49Q96BT1 292 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 MSI2Q96DH6 328 aaKnown RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 DNAJA3Q96EY1 480 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 AURKBQ96GD4 344 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 PYURFQ96I23 114 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CLPTM1LQ96KA5 538 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 Q9H521 79 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 S100A14Q9HCY8 104 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 KRCC1Q9NPI7 259 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CA10Q9NS85 328 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 AP5S1Q9NUS5 200 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 SLAMF8Q9P0V8 285 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 DUSP13Q9UII6 198 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 RASD1Q9Y272 281 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 CUBNO60494 3623 aa8.21□□□□□ -1.1
BRCA1-226ENST00000591534 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
BRCA1-226ENST00000591534 ARPC4-TTLL3A0A0A6YYG9 625 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 HTR3EA5X5Y0 456 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 LIPT2A6NK58 231 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 GNGT2O14610 69 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 TCF21O43680 179 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 AKR7A3O95154 331 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 ATP6V1G2O95670 118 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 OR4A8P0C604 315 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 IGFBP5P24593 272 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 SRP14P37108 136 aaKnown RBP8.2□□□□□ -1.1
BRCA1-226ENST00000591534 MVDP53602 400 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms