RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 DDOQ99489 341 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 TOR3AQ9H497 397 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 GPR35Q9HC97 309 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 KCNJ16Q9NPI9 418 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 B3GAT2Q9NPZ5 323 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 ASB6Q9NWX5 421 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
APOC1-206ENST00000590334 ELOVL5Q9NYP7 299 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 UPB1Q9UBR1 384 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 KLHL21Q9UJP4 597 aa10.63□□□□□ -0.71
APOC1-206ENST00000590334 COL12A1Q99715 3063 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ZNF587BE7ETH6 402 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 H0YJX3 145 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SURF4O15260 269 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SLC16A6O15403 523 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 IGHV3-9P01782 118 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 MPGP29372 298 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 PTDSS1P48651 473 aaKnown RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 EFNB1P98172 346 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ROR2Q01974 943 aaKnown RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.62□□□□□ -0.71
APOC1-206ENST00000590334 FAPQ12884 760 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ITGADQ13349 1161 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SLC35F1Q5T1Q4 408 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 C10orf128Q5T292 105 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SLC25A47Q6Q0C1 308 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ZNF627Q7L945 461 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 UBE2J2Q8N2K1 259 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 GALNT4Q8N4A0 578 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SYT14Q8NB59 555 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 OR52E2Q8NGJ4 325 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 OR6N1Q8NGY5 312 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 SSC4DQ8WTU2 575 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 MCHR2Q969V1 340 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ALKBH3Q96Q83 286 aaPredicted RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 RBP7Q96R05 134 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 PITX2Q99697 317 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 RBM24Q9BX46 236 aaKnown RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 ULBP2Q9BZM5 246 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 VCXQ9H320 206 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 RIBC2Q9H4K1 309 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 CRLF2Q9HC73 371 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 GALNT8Q9NY28 637 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 DIDO1Q9BTC0 2240 aaKnown RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 PCNX1Q96RV3 2341 aa10.62□□□□□ -0.71
APOC1-206ENST00000590334 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
APOC1-206ENST00000590334 CACNA1CQ13936 2221 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 NKX2-6A6NCS4 301 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 OR6C68A6NDL8 312 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 FAM90A27PA6NNH2 459 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 RIIAD1A6NNX1 92 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 M0R3G1 203 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 KRT33AO76009 404 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 SLC2A10O95528 541 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 RENP00797 406 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 IFNGP01579 166 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 ITGA5P08648 1049 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 QDPRP09417 244 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 RNF224P0DH78 156 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 PSMB1P20618 241 aaKnown RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 IGHV1-2P23083 117 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 CD79BP40259 229 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 FOXG1P55316 489 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 SH3BGRP55822 239 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 CD47Q08722 323 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 ZIK1Q3SY52 487 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 SFRP5Q5T4F7 317 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 LEG1Q6P5S2 330 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 STAC2Q6ZMT1 411 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 ZBTB46Q86UZ6 589 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 JAZF1Q86VZ6 243 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 CXorf67Q86X51 503 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 ZNF433Q8N7K0 673 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 SLC37A3Q8NCC5 494 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 C1orf162Q8NEQ5 155 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 SDR9C7Q8NEX9 313 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 OR4K13Q8NH42 304 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 SLC38A2Q96QD8 506 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 NMNAT3Q96T66 252 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 HDHD5Q9BXW7 423 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 PRRG3Q9BZD7 231 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 NMNAT2Q9BZQ4 307 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 VCX3BQ9H321 246 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 FAM118AQ9NWS6 357 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 TAS2R16Q9NYV7 291 aa10.61□□□□□ -0.71
APOC1-206ENST00000590334 NDRG4Q9ULP0 352 aaKnown RBP10.61□□□□□ -0.71
APOC1-206ENST00000590334 HELZ2Q9BYK8 2649 aaKnown RBP10.6□□□□□ -0.71
APOC1-206ENST00000590334 IGKV1D-43A0A0B4J1Z2 117 aa10.6□□□□□ -0.71
APOC1-206ENST00000590334 ZNF99A8MXY4 864 aaPredicted RBP10.6□□□□□ -0.71
APOC1-206ENST00000590334 H7C1C5 153 aa10.6□□□□□ -0.71
APOC1-206ENST00000590334 DHHO43323 396 aa10.6□□□□□ -0.71
APOC1-206ENST00000590334 ZNF3P17036 446 aa10.6□□□□□ -0.71
APOC1-206ENST00000590334 GGT2P36268 569 aa10.6□□□□□ -0.71
APOC1-206ENST00000590334 SLC25A1P53007 311 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms