RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ETFDHQ16134 617 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 SAMD4BQ5PRF9 694 aaKnown RBP10.49□□□□□ -0.73
TPM4-212ENST00000590180 GKAP1Q5VSY0 366 aaPredicted RBP10.49□□□□□ -0.73
TPM4-212ENST00000590180 C11orf71Q6IPW1 123 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 HDDC2Q7Z4H3 204 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 OAFQ86UD1 273 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 DEFB107AQ8IZN7 70 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 PGAM4Q8N0Y7 254 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 SLC22A24Q8N4F4 322 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 ANKS4BQ8N8V4 417 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 ASB10Q8WXI3 467 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 HTRA1Q92743 480 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 MCHR2Q969V1 340 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 NSL1Q96IY1 281 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 RBP7Q96R05 134 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 SH3GL3Q99963 347 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 TXNIPQ9H3M7 391 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 GORASP2Q9H8Y8 452 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 RNF121Q9H920 327 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 NMNAT1Q9HAN9 279 aaPredicted RBP10.49□□□□□ -0.73
TPM4-212ENST00000590180 CA10Q9NS85 328 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 MAN2C1Q9NTJ4 1040 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 NDE1Q9NXR1 346 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 B3GNT2Q9NY97 397 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 STX18Q9P2W9 335 aaKnown RBP10.49□□□□□ -0.73
TPM4-212ENST00000590180 ZNF346Q9UL40 294 aaKnown RBP10.49□□□□□ -0.73
TPM4-212ENST00000590180 HIF3AQ9Y2N7 669 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 NAV3Q8IVL0 2385 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
TPM4-212ENST00000590180 TRAV27A0A087WT01 109 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 FAM171A2A8MVW0 826 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 hCG_2039718K7EN88 272 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 ENTPD5O75356 428 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 DIRAS1O95057 198 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 UBL3O95164 117 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 LY6G6DO95868 133 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 H1F0P07305 194 aaKnown RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 OR4A8P0C604 315 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 HSD17B1P14061 328 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 RHCEP18577 417 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 THBS4P35443 961 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 RPL4P36578 427 aaKnown RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 NUDT6P53370 316 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 RAB39AQ14964 217 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 MST1LQ2TV78 715 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 FGD3Q5JSP0 725 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 ARMC4Q5T2S8 1044 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 PODNL1Q6PEZ8 512 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 MBOAT2Q6ZWT7 520 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 ZNF627Q7L945 461 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 TSEN54Q7Z6J9 526 aaKnown RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 MYPOPQ86VE0 399 aaPredicted RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 IGFN1Q86VF2 1251 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 CCDC197Q8NCU1 140 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 OR4K5Q8NGD3 323 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 OR52J3Q8NH60 311 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 PYURFQ96I23 114 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 COX4I2Q96KJ9 171 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 NSMCE2Q96MF7 247 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 VRK1Q99986 396 aaPredicted RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 RHNO1Q9BSD3 238 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 MRPL13Q9BYD1 178 aaKnown RBP10.48□□□□□ -0.73
TPM4-212ENST00000590180 NOX3Q9HBY0 568 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 TMEM38BQ9NVV0 291 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 NDUFAF4Q9P032 175 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 CD300AQ9UGN4 299 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 MAGEL2Q9UJ55 1249 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 SPEF1Q9Y4P9 236 aa10.48□□□□□ -0.73
TPM4-212ENST00000590180 IGHV2OR16-5A0A0B4J2B6 119 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 CENPBD1B2RD01 187 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 B9A039 149 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 PRSS23O95084 383 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 FAM107AO95990 144 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 TSPAN19P0C672 248 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 ITGA2P17301 1181 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 GPR4P46093 362 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 SLC9A3P48764 834 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 RPL27P61353 136 aaKnown RBP10.47□□□□□ -0.73
TPM4-212ENST00000590180 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
TPM4-212ENST00000590180 CD47Q08722 323 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 DAG1Q14118 895 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 TAF11Q15544 211 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 ADIPOQQ15848 244 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 SGCAQ16586 387 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 HIST3H3Q16695 136 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 SWI5Q1ZZU3 235 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 ANKDD1AQ495B1 522 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 KRT80Q6KB66 452 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 TMEM53Q6P2H8 277 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 SLC16A14Q7RTX9 510 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 LRRC18Q8N456 261 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 FITM2Q8N6M3 262 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 FAM86B1Q8N7N1 296 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 NOXO1Q8NFA2 376 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 OR13C2Q8NGS9 318 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 FGFBP3Q8TAT2 258 aa10.47□□□□□ -0.73
TPM4-212ENST00000590180 NSMAFQ92636 917 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms