RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 UBQLNLQ8IYU4 475 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 GHDCQ8N2G8 530 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 NLGN4YQ8NFZ3 816 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 SMAP2Q8WU79 429 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 ZNRF4Q8WWF5 429 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ASB17Q8WXJ9 295 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ZNF524Q96C55 264 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 GFM1Q96RP9 751 aaKnown RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 KCNJ15Q99712 375 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 KLHDC3Q9BQ90 382 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 WDR77Q9BQA1 342 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 TTTY10Q9BZA0 68 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 C11orf54Q9H0W9 315 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 SLITRK2Q9H156 845 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 TXNIPQ9H3M7 391 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ASCL3Q9NQ33 180 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 SDHAF3Q9NRP4 125 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 RBFOX1Q9NWB1 397 aaKnown RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 LAMP5Q9UJQ1 280 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 ZNF346Q9UL40 294 aaKnown RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 KIF26BQ2KJY2 2108 aa8.98□□□□□ -0.97
VPS25-202ENST00000589219 COL27A1Q8IZC6 1860 aaPredicted RBP8.98□□□□□ -0.97
VPS25-202ENST00000589219 CCDC187A0A096LP49 1063 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 IGHV3-20A0A0C4DH32 117 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 PRSS37A4D1T9 235 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 FAM47E-STBD1D6RA91 191 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 FTCDNL1E5RQL4 147 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 ERVH48-1M5A8F1 160 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 PLPP3O14495 311 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 KLK10O43240 276 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 ARHGEF9O43307 516 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 KALRNO60229 2985 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 CRABP1P29762 137 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 GRPRP30550 384 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 CCKBRP32239 447 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 PITPNBP48739 271 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 DAP3P51398 398 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 HCCSP53701 268 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 FBXW4P57775 412 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 OR10A3P58181 314 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 RPS11P62280 158 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS25-202ENST00000589219 PITPNAQ00169 270 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 RASGEF1BQ0VAM2 473 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 ZP4Q12836 540 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 CBX3Q13185 183 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 EIF3IQ13347 325 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 ALKBH1Q13686 389 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 P2RY14Q15391 338 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 SLC25A53Q5H9E4 307 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 PHF19Q5T6S3 580 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 FAM27D1Q5T7N8 215 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 MRPL14Q6P1L8 145 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 POMZP3Q6PJE2 187 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 SHISA6Q6ZSJ9 500 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 ADGRG3Q86Y34 549 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 SAMD12Q8N8I0 201 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 SLC38A9Q8NBW4 561 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 OR4M1Q8NGD0 313 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 OR13C5Q8NGS8 318 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 OR6N2Q8NGY6 317 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 MFSD8Q8NHS3 518 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 DUSP19Q8WTR2 217 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 RFT1Q96AA3 541 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 DDIT4LQ96D03 193 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 WBP1Q96G27 269 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 ADAD1Q96M93 576 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 DERL3Q96Q80 235 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 OR14A2Q96R54 314 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 STRADBQ9C0K7 418 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 COMMD4Q9H0A8 199 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 SYT4Q9H2B2 425 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 PPIL3Q9H2H8 161 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 B3GAT2Q9NPZ5 323 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 TAS2R5Q9NYW4 299 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 MALT1Q9UDY8 824 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 GPN3Q9UHW5 284 aaPredicted RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
VPS25-202ENST00000589219 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
VPS25-202ENST00000589219 UNC13CQ8NB66 2214 aa8.96□□□□□ -0.97
VPS25-202ENST00000589219 GCN1Q92616 2671 aaKnown RBP8.96□□□□□ -0.97
VPS25-202ENST00000589219 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 TRBV5-5A0A0J9YX44 114 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 TMEM212A6NML5 194 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 CENPBD1B2RD01 187 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 B4DXG7 233 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 C9J4A7 227 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 C11orf98E9PRG8 122 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 H7C1C5 153 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 NTN3O00634 580 aaPredicted RBP8.96□□□□□ -0.98
VPS25-202ENST00000589219 PLA2G10O15496 165 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 LYRM1O43325 122 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 GMFGO60234 142 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 ZNF254O75437 659 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 UPK3AO75631 287 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 UBL3O95164 117 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 EIF4EP06730 217 aaKnown RBP8.96□□□□□ -0.98
VPS25-202ENST00000589219 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 OR8G3PP0DMU2 310 aa8.96□□□□□ -0.98
VPS25-202ENST00000589219 EPXP11678 715 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms