RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DHHO43323 396 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 CCNB2O95067 398 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 GASTP01350 101 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 HOXB1P14653 301 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-207ENST00000588542 HOXC12P31275 282 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF83P51522 516 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 IST1P53990 364 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 TUBA1BP68363 451 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 TUBA4AP68366 448 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 CCNIQ14094 377 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 MICAQ29983 383 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 C1orf146Q5VVC0 180 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 SMARCD3Q6STE5 483 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 TUBA1AQ71U36 451 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 TMEM179BQ7Z7N9 219 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 CLDN22Q8N7P3 220 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 ARIH2OSQ8N7S6 290 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 Q96M85 177 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 FOXB1Q99853 325 aa17.65■□□□□ 0.42
DDX39A-207ENST00000588542 ESRP2Q9H6T0 727 aaKnown RBP17.65■□□□□ 0.42
DDX39A-207ENST00000588542 DSCAMO60469 2012 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 IGKV1D-43A0A0B4J1Z2 117 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 WNT11O96014 354 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 FMODQ06828 376 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 C10orf128Q5T292 105 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 FAM205BPQ63HN1 556 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 KLHL24Q6TFL4 600 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 ZNF813Q6ZN06 617 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 ZNF704Q6ZNC4 412 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-207ENST00000588542 LILRB1Q8NHL6 650 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-207ENST00000588542 FANK1Q8TC84 345 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 ALG12Q9BV10 488 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 OR52D1Q9H346 318 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 PLCE1Q9P212 2302 aa17.64■□□□□ 0.41
DDX39A-207ENST00000588542 A6NIZ1 184 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 M0R1B8 84 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 SLC2A10O95528 541 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 CD3EP07766 207 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 B4GALT1P15291 398 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 UBE2NP61088 152 aaKnown RBP17.63■□□□□ 0.41
DDX39A-207ENST00000588542 RAP1BP61224 184 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 RAP1AP62834 184 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 GK3PQ14409 553 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 RFX4Q33E94 735 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 MESTQ5EB52 335 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 SLC25A47Q6Q0C1 308 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 DPY19L2P2Q6ZN68 376 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 ZNF620Q6ZNG0 422 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 AQP11Q8NBQ7 271 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 RASD2Q96D21 266 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 NDEL1Q9GZM8 345 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 YY1AP1Q9H869 796 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 ZNF224Q9NZL3 707 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 CRNNQ9UBG3 495 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-207ENST00000588542 GRHPRQ9UBQ7 328 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
DDX39A-207ENST00000588542 MAGED1Q9Y5V3 778 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-207ENST00000588542 ARHGEF9O43307 516 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 PTAFRP25105 342 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 CD40P25942 277 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 SDHAP31040 664 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 CD47Q08722 323 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 KLHL17Q6TDP4 642 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 TMEM108Q6UXF1 575 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 CDH24Q86UP0 819 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 HTRA1Q92743 480 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 DUS3LQ96G46 650 aaKnown RBP17.62■□□□□ 0.41
DDX39A-207ENST00000588542 SAMD8Q96LT4 415 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 ZNF570Q96NI8 536 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 DGCR6LQ9BY27 220 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 SMURF2Q9HAU4 748 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 TMEM38BQ9NVV0 291 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 B3GNT2Q9NY97 397 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 DNAJB9Q9UBS3 223 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 UGT2A1Q9Y4X1 527 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 IER3IP1Q9Y5U9 82 aa17.62■□□□□ 0.41
DDX39A-207ENST00000588542 IGHV1-18A0A0C4DH31 117 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 TEX13CA0A0J9YWL9 993 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 H7C1C5 153 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 GNGT2O14610 69 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 ABCD4O14678 606 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 TIPRLO75663 272 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 PPP1R3DO95685 299 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 TXNDC12O95881 172 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 LCN6P62502 163 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 SPOCK1Q08629 439 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 THEM4Q5T1C6 240 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 GPR139Q6DWJ6 353 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 SKA3Q8IX90 412 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 CCDC36Q8IYA8 594 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 SLC22A24Q8N4F4 322 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 KBTBD8Q8NFY9 601 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 OR10G2Q8NGC3 310 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 GIPC3Q8TF64 312 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 NEUROG1Q92886 237 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 GTPBP3Q969Y2 492 aaKnown RBP17.61■□□□□ 0.41
DDX39A-207ENST00000588542 EGLN3Q9H6Z9 239 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 NTN4Q9HB63 628 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 NOX3Q9HBY0 568 aa17.61■□□□□ 0.41
DDX39A-207ENST00000588542 ARMC1Q9NVT9 282 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms