RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 UPK3AO75631 287 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 TIPRLO75663 272 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 ACADSP16219 412 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 RPS6KA3P51812 740 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 MELKQ14680 651 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 GPR139Q6DWJ6 353 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 DPY19L2P2Q6ZN68 376 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 AQP11Q8NBQ7 271 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 OR52L1Q8NGH7 329 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 ASB10Q8WXI3 467 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 C18orf12Q96KH6 178 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 GPX7Q96SL4 187 aaPredicted RBP20.28■□□□□ 0.84
LSM7-202ENST00000585395 DGCR6LQ9BY27 220 aa20.28■□□□□ 0.84
LSM7-202ENST00000585395 M0R3G1 203 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 PDLIM1O00151 329 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 RAD51DO75771 328 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 ATE1O95260 518 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 COX10Q12887 443 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 TOP3AQ13472 1001 aaPredicted RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 KPNB1Q14974 876 aaKnown RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 TAB1Q15750 504 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 ATP6AP1Q15904 470 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 TIMM23BQ5SRD1 257 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 Q71RC1 249 aaPredicted RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 OR9Q2Q8NGE9 314 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 HS3ST6Q96QI5 342 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 ALG12Q9BV10 488 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 KATNB1Q9BVA0 655 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 ESRP2Q9H6T0 727 aaKnown RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 GPR35Q9HC97 309 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 MOV10Q9HCE1 1003 aaKnown RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 VNN3Q9NY84 501 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 GLTPQ9NZD2 209 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 PDP1Q9P0J1 537 aaPredicted RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 POFUT2Q9Y2G5 429 aa20.27■□□□□ 0.84
LSM7-202ENST00000585395 MAGED1Q9Y5V3 778 aaPredicted RBP20.27■□□□□ 0.84
LSM7-202ENST00000585395 CSPG4Q6UVK1 2322 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 A0A1W2PPR1 153 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 OR5H1A6NKK0 313 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 ITGA5P08648 1049 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 APEHP13798 732 aaKnown RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 ANXA8P13928 327 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 HOXB1P14653 301 aaPredicted RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 ACVR1BP36896 505 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 PPP1R8Q12972 351 aaKnown RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 PPA1Q15181 289 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 RFX4Q33E94 735 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 ARMC4Q5T2S8 1044 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 ZNF770Q6IQ21 691 aaPredicted RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 IGFN1Q86VF2 1251 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 CLDN22Q8N7P3 220 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 LRRC75AQ8NAA5 344 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 NOXO1Q8NFA2 376 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 DNAJC9Q8WXX5 260 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 TMEM54Q969K7 222 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 ZNF570Q96NI8 536 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 MUS81Q96NY9 551 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 RBP7Q96R05 134 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 MDFIQ99750 246 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 SMR3AQ99954 134 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 REPIN1Q9BWE0 567 aaKnown RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 OR52D1Q9H346 318 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 CRLF2Q9HC73 371 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 OBP2BQ9NPH6 170 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 ZNF346Q9UL40 294 aaKnown RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 AMDHD2Q9Y303 409 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 CDH10Q9Y6N8 788 aa20.26■□□□□ 0.83
LSM7-202ENST00000585395 FN1P02751 2386 aaKnown RBP20.26■□□□□ 0.83
LSM7-202ENST00000585395 AHCYL1O43865 530 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 GASTP01350 101 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 PGA4P0DJD7 388 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 PGA3P0DJD8 388 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 ZNF84P51523 738 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 ERVK-25P63136 954 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 FHL1Q13642 323 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 GABRA6Q16445 453 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 CEACAM16Q2WEN9 425 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 DEFB113Q30KQ7 82 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 C9orf135Q5VTT2 229 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 ANKRD16Q6P6B7 361 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 SHQ1Q6PI26 577 aaKnown RBP20.25■□□□□ 0.83
LSM7-202ENST00000585395 ZNF704Q6ZNC4 412 aaPredicted RBP20.25■□□□□ 0.83
LSM7-202ENST00000585395 RASSF6Q6ZTQ3 369 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 HIPK1Q86Z02 1210 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 ARIH2OSQ8N7S6 290 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 OR5K1Q8NHB7 308 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 CCL19Q99731 98 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 NRIP3Q9NQ35 241 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 COL6A5A8TX70 2615 aa20.25■□□□□ 0.83
LSM7-202ENST00000585395 ZNF99A8MXY4 864 aaPredicted RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 IMPA2O14732 288 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 TRMUO75648 421 aaKnown RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 WNT11O96014 354 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 CD3EP07766 207 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 CDH2P19022 906 aaPredicted RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 SDHAP31040 664 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 UBE2NP61088 152 aaKnown RBP20.24■□□□□ 0.83
LSM7-202ENST00000585395 CD47Q08722 323 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 ZNF620Q6ZNG0 422 aa20.24■□□□□ 0.83
LSM7-202ENST00000585395 ADCK1Q86TW2 530 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms