RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 K7EPI3 171 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF207O43670 478 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 SMPD2O60906 423 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 BCHEP06276 602 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 IQCF3P0C7M6 154 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 AK4P27144 223 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 CD86P42081 329 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 CSNK1A1P48729 337 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 IRX3P78415 501 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 PITPNAQ00169 270 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 LOXL1Q08397 574 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 CDC20Q12834 499 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 PRPSAP1Q14558 356 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 FAM78AQ5JUQ0 283 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 PHYHD1Q5SRE7 291 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 RAET1LQ5VY80 246 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 OR4F3Q6IEY1 312 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 LRP11Q86VZ4 500 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 VSTM4Q8IW00 320 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 OR5D13Q8NGL4 314 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 OR2T34Q8NGX1 318 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 FAM110BQ8TC76 370 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 RBM14Q96PK6 669 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 MTMR9Q96QG7 549 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 OR8B4Q96RC9 309 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF382Q96SR6 550 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 SORT1Q99523 831 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 CCT7Q99832 543 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 RARRES2Q99969 163 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 FAIM2Q9BWQ8 316 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 MRPL37Q9BZE1 423 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 ISYNA1Q9NPH2 558 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 POLE4Q9NR33 117 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 SLC35D1Q9NTN3 355 aa1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 CGNQ9P2M7 1197 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 TET2Q6N021 2002 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-206ENST00000581631 IGKV3D-11A0A0A0MRZ8 115 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 A8MUU9 505 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 K7EQM0 130 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 SCGNO76038 276 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 KRT8P05787 483 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 OR56A5P0C7T3 313 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 NCK1P16333 377 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 RFX3P48380 749 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 ATP1B3P54709 279 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF816Q0VGE8 651 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 CDC37Q16543 378 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 DGUOKQ16854 277 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 PDZK1Q5T2W1 519 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 DNAJC24Q6P3W2 148 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 CEMP1Q6PRD7 247 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 ENPP6Q6UWR7 440 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 TMEM179Q6ZVK1 233 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 ABHD13Q7L211 337 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 NECAP1Q8NC96 275 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 OR4S2Q8NH73 311 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 DTNBP1Q96EV8 351 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 RNF157Q96PX1 679 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF607Q96SK3 696 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 RNF5Q99942 180 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 RAB33BQ9H082 229 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 TMOD2Q9NZR1 351 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 MRPS18BQ9Y676 258 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 TNS2Q63HR2 1409 aa1.49□□□□□ -2.17
SMCHD1-206ENST00000581631 GPR179Q6PRD1 2367 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF850A8MQ14 1090 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 FCMRO60667 390 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 OR7A10O76100 309 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CDRT1O95170 752 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 IGHV2-5P01817 119 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 IL4P05112 153 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 FGF1P05230 155 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 GNAO1P09471 354 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CD34P28906 385 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 ATP5C1P36542 298 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 FDFT1P37268 417 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CDKN2BP42772 138 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 RORCP51449 518 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CDH4P55283 916 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 BPIFB3P59826 476 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 POLR2FP61218 127 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 MEF2BQ02080 365 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 PRMT9Q6P2P2 845 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 KDM7AQ6ZMT4 941 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 BHLHA15Q7RTS1 189 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CEP112Q8N8E3 955 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 OR2G2Q8NGZ5 317 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 THRSPQ92748 146 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 EMG1Q92979 244 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 HSFY1Q96LI6 401 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 DOK1Q99704 481 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 PARD6BQ9BYG5 372 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 PPA2Q9H2U2 334 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 RIBC2Q9H4K1 309 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 RPF2Q9H7B2 306 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 SYNDIG1Q9H7V2 258 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 LIN28AQ9H9Z2 209 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 S4R3C0 116 aa1.48□□□□□ -2.17
SMCHD1-206ENST00000581631 CDHR2Q9BYE9 1310 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms