RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PRDM13Q9H4Q3 707 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GSTO2Q9H4Y5 243 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 NANOGQ9H9S0 305 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 FN3KRPQ9HA64 309 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PATZ1Q9HBE1 687 aaKnown RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 CDH20Q9HBT6 801 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 TCF7L2Q9NQB0 619 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 SLC6A13Q9NSD5 602 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 MRGBPQ9NV56 204 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 AURKAIP1Q9NWT8 199 aaPredicted RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 BAIAP2L1Q9UHR4 511 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ATP6V1HQ9UI12 483 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 POFUT2Q9Y2G5 429 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 A0A1W2PPM1 405 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 CLDN24A6NM45 220 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SPRY3O43610 288 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 XPNPEP2O43895 674 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 UBOX5O94941 541 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 PTHP01270 115 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 IGHV2-70P01814 119 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SERPINA5P05154 406 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 TFPTP0C1Z6 253 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SBK2P0C263 348 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 PNMTP11086 282 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 LAMP1P11279 417 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SLC6A9P48067 706 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 GNGT1P63211 74 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 PAX8Q06710 450 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 BST1Q10588 318 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 EPS8Q12929 822 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 PMS2P3Q13401 168 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 MPP2Q14168 576 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 RAB39AQ14964 217 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 LARS2Q15031 903 aaKnown RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 TBC1D28Q2M2D7 210 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 GALNTL6Q49A17 601 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 GPAT3Q53EU6 434 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 CFAP157Q5JU67 520 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 C1orf140Q5VVS0 124 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 TYW3Q6IPR3 259 aaKnown RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 C11orf87Q6NUJ2 197 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 BRD3OSQ6XYD6 125 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 Q6YL49 198 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 FRRS1Q6ZNA5 592 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 GDPGP1Q6ZNW5 385 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 Q6ZTK2 550 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 BTN2A1Q7KYR7 527 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 OLIG3Q7RTU3 272 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 RNF130Q86XS8 419 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 ZNF440Q8IYI8 595 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 TMEM151AQ8N4L1 468 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SLC30A7Q8NEW0 376 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 OR7A2PQ8NGA2 310 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 TCP10LQ8TDR4 215 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 LRRC8CQ8TDW0 803 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 LRTOMTQ8WZ04 291 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 CNOT9Q92600 299 aaKnown RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 ROPN1LQ96C74 230 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 ZNF837Q96EG3 531 aaPredicted RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 NEURL3Q96EH8 262 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 ZNF75AQ96N20 296 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 FOXB1Q99853 325 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 MECRQ9BV79 373 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SSBP3Q9BWW4 388 aaPredicted RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 ULBP2Q9BZM5 246 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SLC19A3Q9BZV2 496 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 DPY30Q9C005 99 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 OR51B6Q9H340 312 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 OR51I1Q9H343 314 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 NPHS2Q9NP85 383 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 CYSLTR2Q9NS75 346 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 CGGBP1Q9UFW8 167 aaPredicted RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 EGFL7Q9UHF1 273 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 CCL27Q9Y4X3 112 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 SNX5Q9Y5X3 404 aa4.96□□□□□ -1.62
SMG6-219ENST00000575663 HEATR1Q9H583 2144 aaKnown RBP4.96□□□□□ -1.62
SMG6-219ENST00000575663 IGHV2-70DA0A0C4DH43 119 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 A6NJY4 79 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 F5H0A9 414 aaPredicted RBP4.95□□□□□ -1.62
SMG6-219ENST00000575663 NDUFAB1O14561 156 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 AIM2O14862 343 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 LSM1O15116 133 aaKnown RBP4.95□□□□□ -1.62
SMG6-219ENST00000575663 DHHO43323 396 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 GPR137BO60478 399 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 PLIN3O60664 434 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 LYPLA1O75608 230 aaPredicted RBP4.95□□□□□ -1.62
SMG6-219ENST00000575663 FARS2O95363 451 aaKnown RBP4.95□□□□□ -1.62
SMG6-219ENST00000575663 SNAP29O95721 258 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 IGHV1-46P01743 117 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 IGHV3-13P01766 116 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 BPGMP07738 259 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 SFTPBP07988 381 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 MELTFP08582 738 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 OR12D1P0DN82 309 aa4.95□□□□□ -1.62
SMG6-219ENST00000575663 CPA3P15088 417 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms