RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C14orf79Q96F83 325 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 ZNF285Q96NJ3 590 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 LMF1Q96S06 567 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SPSB2Q99619 263 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 ZNF350Q9GZX5 532 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 UBE2CO00762 179 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ITGA5P08648 1049 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ZNF28P17035 718 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 NKPD1Q17RQ9 610 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ZNF627Q7L945 461 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 SLC29A4Q7RTT9 530 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 CCDC74AQ96AQ1 378 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 CLCC1Q96S66 551 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 DPP7Q9UHL4 492 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 VCANP13611 3396 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 NDUFB2O95178 105 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 AGR2O95994 175 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 AIMP2Q13155 320 aaKnown RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 TGIF1Q15583 401 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 CEBPEQ15744 281 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ACER2Q5QJU3 275 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 TMEM205Q6UW68 189 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 ZAR1Q86SH2 424 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 EDAQ92838 391 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 NRIP2Q9BQI9 281 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 NAA11Q9BSU3 229 aaPredicted RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 MRM2Q9UI43 246 aaKnown RBP13.1□□□□□ -0.31
SMG6-215ENST00000574501 DTX4Q9Y2E6 619 aa13.1□□□□□ -0.31
SMG6-215ENST00000574501 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 A0A1B0GX12 115 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 TMEM127O75204 238 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 UPK3AO75631 287 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 S100PP25815 95 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 HSD17B2P37059 387 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 RPS27P42677 84 aaKnown RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 F2RL1P55085 397 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 TAS2R19P59542 299 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ELAVL1Q15717 326 aaKnown RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 ALG10BQ5I7T1 473 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ZNF684Q5T5D7 378 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 CD163Q86VB7 1156 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ZNF676Q8N7Q3 588 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 COX18Q8N8Q8 333 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 GPX8Q8TED1 209 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 IRF7Q92985 503 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 TRIM43Q96BQ3 446 aaPredicted RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 SEH1LQ96EE3 360 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 CAPNS2Q96L46 248 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 SEMA6CQ9H3T2 930 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 SEBOXQ9HB31 216 aaPredicted RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 MMP26Q9NRE1 261 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 RXFP3Q9NSD7 469 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 RCC2Q9P258 522 aaKnown RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 ZNF208O43345 1280 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 VEGFDO43915 354 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 DNAJB6O75190 326 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 HTR3BO95264 441 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 SOD2P04179 222 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 APEHP13798 732 aaKnown RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 ST6GAL1P15907 406 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 DDX6P26196 483 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMG6-215ENST00000574501 FLT3LGP49771 235 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 PRKCZQ05513 592 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 NOGQ13253 232 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 BPIFB2Q8N4F0 458 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 CASTOR1Q8WTX7 329 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
SMG6-215ENST00000574501 RSRP1Q9BUV0 290 aa13.09□□□□□ -0.31
SMG6-215ENST00000574501 LAT2Q9GZY6 243 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms