RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PPOXP50336 477 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 PDLIM4P50479 330 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 LSM11P83369 360 aaKnown RBP eCLIP22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 LAPTM4AQ15012 233 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 TMEM249Q2WGJ8 235 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 ZCCHC24Q8N2G6 241 aaKnown RBP22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 SYT14Q8NB59 555 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 LIPHQ8WWY8 451 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 ASB10Q8WXI3 467 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 MCHR2Q969V1 340 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 PRRC1Q96M27 445 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 SH3GL3Q99963 347 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 ELAC2Q9BQ52 826 aaKnown RBP22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 RHCGQ9UBD6 479 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 ADAM21Q9UKJ8 722 aa22.5■■□□□ 1.19
NPLOC4-215ENST00000574095 J3KTA2 159 aa22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 GSTA4O15217 222 aa22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 CARTPTQ16568 116 aa22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 C8orf82Q6P1X6 216 aaPredicted RBP22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 MRPL13Q9BYD1 178 aaKnown RBP22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 DENND2DQ9H6A0 471 aaPredicted RBP22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 CMAHPQ9Y471 501 aa22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 SONP18583 2426 aaKnown RBP22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 JMJD1CQ15652 2540 aa22.49■■□□□ 1.19
NPLOC4-215ENST00000574095 TRMUO75648 421 aaKnown RBP22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 ZNF682O95780 498 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 TSPAN19P0C672 248 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 IFI30P13284 250 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 ACADSP16219 412 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 IFNA8P32881 189 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 GSK3BP49841 420 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 NUDT2P50583 147 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 SEC24CP53992 1094 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 HIST3H3Q16695 136 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 MSMPQ1L6U9 139 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 ZNF584Q8IVC4 421 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 CDK20Q8IZL9 346 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 NOXO1Q8NFA2 376 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 RAB1BQ9H0U4 201 aa22.48■■□□□ 1.19
NPLOC4-215ENST00000574095 KIAA1324LA8MWY0 1029 aaPredicted RBP22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 ATP8B1O43520 1251 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 FARS2O95363 451 aaKnown RBP22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 IFNW1P05000 195 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 DAP3P51398 398 aaKnown RBP22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 CBLL1Q75N03 491 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 MEX3DQ86XN8 651 aaKnown RBP22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 OR4K5Q8NGD3 323 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 BPIFA2Q96DR5 249 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 FOXN4Q96NZ1 517 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 SPEF1Q9Y4P9 236 aa22.47■■□□□ 1.19
NPLOC4-215ENST00000574095 VWC2LB2RUY7 222 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 SERPINA5P05154 406 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 USF1P22415 310 aaPredicted RBP22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 GALK2Q01415 458 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 ARMC4Q5T2S8 1044 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 GKAP1Q5VSY0 366 aaPredicted RBP22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 HACD2Q6Y1H2 254 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 SEPHS2Q99611 448 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 PIMREGQ9BSJ6 248 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 FNDC11Q9BVV2 318 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 MRPL37Q9BZE1 423 aaKnown RBP22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 RNF121Q9H920 327 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 DYNLRB1Q9NP97 96 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 MAN2C1Q9NTJ4 1040 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 FBXO9Q9UK97 447 aaPredicted RBP22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 FBXL3Q9UKT7 428 aa22.46■■□□□ 1.19
NPLOC4-215ENST00000574095 A8MV72 311 aaPredicted RBP22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 NDUFS8O00217 210 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 FFAR1O14842 300 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 ENTPD5O75356 428 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 SERPINA1P01009 418 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 IGFBP1P08833 259 aaPredicted RBP22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 ADRA2AP08913 450 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 MAKP20794 623 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 GLRXP35754 106 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 ZNF84P51523 738 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 VLDLRP98155 873 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 GGTLC2Q14390 218 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 IFI44LQ53G44 452 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 ALG10Q5BKT4 473 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 C6orf52Q5T4I8 152 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 FKBP9P1Q75LS8 142 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 HDDC2Q7Z4H3 204 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 NRMQ8IXM6 262 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 OFCC1Q8IZS5 231 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 GEMIN6Q8WXD5 167 aaKnown RBP22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 HDAC2Q92769 488 aaKnown RBP22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 MRPL24Q96A35 216 aaKnown RBP22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 FAM107BQ9H098 131 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 MYLK2Q9H1R3 596 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 HIF3AQ9Y2N7 669 aa22.45■■□□□ 1.18
NPLOC4-215ENST00000574095 LOC390937A0A1W2PQ73 354 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 CENPBD1B2RD01 187 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 SLC2A10O95528 541 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 NCK1P16333 377 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 NR4A2P43354 598 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 TRAM2Q15035 370 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 TMEM53Q6P2H8 277 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 SLC16A14Q7RTX9 510 aa22.44■■□□□ 1.18
NPLOC4-215ENST00000574095 LRRC18Q8N456 261 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms