RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 SNAP29O95721 258 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 IL32P24001 234 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 EPHA2P29317 976 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 MPGP29372 298 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 HOXC12P31275 282 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 POLR2IP36954 125 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CD79BP40259 229 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 GUCA1AP43080 201 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 PTDSS1P48651 473 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF84P51523 738 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CDC42P60953 191 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CDK5Q00535 292 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 TGFBR3Q03167 851 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 FMODQ06828 376 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CRMP1Q14194 572 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 SNCBQ16143 134 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CEACAM16Q2WEN9 425 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 PHYHD1Q5SRE7 291 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 THEM4Q5T1C6 240 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 ACSM5Q6NUN0 579 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF474Q6S9Z5 364 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 PTCHD4Q6ZW05 846 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CXorf67Q86X51 503 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 HEATR5AQ86XA9 2040 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 WDFY1Q8IWB7 410 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 GABRG1Q8N1C3 465 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC37A3Q8NCC5 494 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 NRG4Q8WWG1 115 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 RNASE6Q93091 150 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 MCHR2Q969V1 340 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 MRPL13Q9BYD1 178 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 GPR35Q9HC97 309 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 RPRD1BQ9NQG5 326 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 CMC2Q9NRP2 79 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 IMPAD1Q9NX62 359 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 TAS2R16Q9NYV7 291 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 JKAMPQ9P055 326 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 GMPPBQ9Y5P6 360 aa8.33□□□□□ -1.08
NPLOC4-208ENST00000572351 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 ZAR1LA6NP61 321 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 C16orf97H3BN30 126 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SURF4O15260 269 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 DHHO43323 396 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC16A7O60669 478 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 KHDRBS3O75525 346 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 RAD51DO75771 328 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 IGHV1-2P23083 117 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 CRABP1P29762 137 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 CDKN2AP42771 156 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SH3BGRP55822 239 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 FAM27E3Q08E93 113 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 CDSNQ15517 529 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 STK11Q15831 433 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SFRP5Q5T4F7 317 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SLX4IPQ5VYV7 408 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 PLBD1Q6P4A8 553 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 KLHL24Q6TFL4 600 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 CYB561A3Q8NBI2 242 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 PROKR2Q8NFJ6 384 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 STEAP2Q8NFT2 490 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 OR2T4Q8NH00 348 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 FAM81AQ8TBF8 368 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SNX18Q96RF0 628 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 MBOAT4Q96T53 435 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 NUAK2Q9H093 628 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 FN3KQ9H479 309 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 SEC61A2Q9H9S3 476 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 VSX1Q9NZR4 365 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 GPR52Q9Y2T5 361 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 FAM208BQ5VWN6 2430 aa8.32□□□□□ -1.08
NPLOC4-208ENST00000572351 COL6A6A6NMZ7 2263 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 A0A096LPE4 126 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 A0A1W2PPZ6 126 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 OR6C68A6NDL8 312 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 FAM183AA6NL82 134 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF99A8MXY4 864 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 PRR23D1E9PI22 279 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 RPL36A-HNRNPH2H7BZ11 118 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 TLX2O43763 284 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 SEC14L2O76054 403 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 FARS2O95363 451 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 ITGA5P08648 1049 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 RNF224P0DH78 156 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 PRR23D2P0DMB1 279 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 B4GALT1P15291 398 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 CTLA4P16410 223 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 COX5AP20674 150 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 UGT2B10P36537 528 aa8.31□□□□□ -1.08
NPLOC4-208ENST00000572351 VHLP40337 213 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms