RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 SEC24CP53992 1094 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 DVL1P1P54792 670 aaPredicted RBP11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 CCNIQ14094 377 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 MAD2L1BPQ15013 274 aaPredicted RBP11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 VMACQ2NL98 169 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 NRN1LQ496H8 165 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 NANOGNBQ7Z5D8 188 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 DPPA2Q7Z7J5 298 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 NOXO1Q8NFA2 376 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 OR10A6Q8NH74 314 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 RASSF5Q8WWW0 418 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 SEPHS2Q99611 448 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 SIKE1Q9BRV8 207 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 RACGAP1Q9H0H5 632 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 MEPEQ9NQ76 525 aaPredicted RBP11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
ATP2A3-211ENST00000572176 FXYD1O00168 92 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 EDF1O60869 148 aaKnown RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 FARS2O95363 451 aaKnown RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 SNAP29O95721 258 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 BCL10O95999 233 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 IGHG1P01857 330 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 QDPRP09417 244 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 TCN1P20061 433 aaPredicted RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 GPR6P46095 362 aaPredicted RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 HIST3H3Q16695 136 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 CARM1Q86X55 608 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 PAQR4Q8N4S7 273 aaPredicted RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 SLC30A7Q8NEW0 376 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 SLC26A7Q8TE54 656 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 RDH5Q92781 318 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 YIPF5Q969M3 257 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 MRPL13Q9BYD1 178 aaKnown RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 NPHS2Q9NP85 383 aa11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 ZNF346Q9UL40 294 aaKnown RBP11.03□□□□□ -0.64
ATP2A3-211ENST00000572176 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 A0A0G2JND7 137 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 A0A1W2PPW3 197 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 SLC22A23A1A5C7 686 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 CENPBD1B2RD01 187 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 B4DSR2 109 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 FBP2O00757 339 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 RP2O75695 350 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 IGF2P01344 180 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 MT-ND1P03886 318 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 VIMP08670 466 aaKnown RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 SAGP10523 405 aaPredicted RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 UMPSP11172 480 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 NAT2P11245 290 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 PCMT1P22061 227 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 COL8A2P25067 703 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 RBM34P42696 430 aaKnown RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 ZNF133P52736 654 aaPredicted RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 UGT2B15P54855 530 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 CLRN1P58418 232 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 RUNX1T1Q06455 604 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 RPL18Q07020 188 aaKnown RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 SLC36A2Q495M3 483 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 LIPNQ5VXI9 398 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 RGS7BPQ6MZT1 257 aaPredicted RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 TMEM53Q6P2H8 277 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 CALHM3Q86XJ0 350 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 OR4K5Q8NGD3 323 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 PFN4Q8NHR9 129 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 CLDND2Q8NHS1 167 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 ASB10Q8WXI3 467 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 MCHR2Q969V1 340 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 POLR2J2Q9GZM3 115 aaKnown RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 POLR2J3Q9H1A7 115 aaKnown RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 DUSP13Q9UII6 198 aa11.02□□□□□ -0.65
ATP2A3-211ENST00000572176 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 BLOC1S5-TXNDC5H3BN57 136 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 WNT9BO14905 357 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 TCF21O43680 179 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 OR7A10O76100 309 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 OR5F1O95221 314 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 CLPTM1O96005 669 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 TFP02787 698 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 HIST1H2ABP04908 130 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 TSPAN19P0C672 248 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 CCL2P13500 99 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 ZNF250P15622 560 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 SRP14P37108 136 aaKnown RBP11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 DAP3P51398 398 aaKnown RBP11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 TMEM33P57088 247 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 CYLC2Q14093 348 aaPredicted RBP11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
ATP2A3-211ENST00000572176 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms