RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 VHLLQ6RSH7 139 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 DEF8Q6ZN54 512 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF584Q8IVC4 421 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SKA3Q8IX90 412 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SGTBQ96EQ0 304 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MS4A3Q96HJ5 214 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PRRC1Q96M27 445 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 VRK1Q99986 396 aaPredicted RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 C1orf198Q9H425 327 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SMURF2Q9HAU4 748 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CDC42EP3Q9UKI2 254 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MXRA5Q9NR99 2828 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 A0A1W2PRG6 482 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 BLOC1S5-TXNDC5H3BN57 136 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FARS2O95363 451 aaKnown RBP14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 UMPSP11172 480 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FUT1P19526 365 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TNFRSF1BP20333 461 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PTDSS1P48651 473 aaKnown RBP14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GZMKP49863 264 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ST3GAL3Q11203 375 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HSP90B2PQ58FF3 399 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 C8orf82Q6P1X6 216 aaPredicted RBP14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HACD2Q6Y1H2 254 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SPATA21Q7Z572 469 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SVOPLQ8N434 492 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ANKS4BQ8N8V4 417 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NOXO1Q8NFA2 376 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PFN4Q8NHR9 129 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ASB10Q8WXI3 467 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LZICQ8WZA0 190 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HOPXQ9BPY8 73 aaPredicted RBP14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 C20orf141Q9NUB4 165 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CMTM6Q9NX76 183 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SLC7A8Q9UHI5 535 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 A4GNTQ9UNA3 340 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HIF3AQ9Y2N7 669 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MED31Q9Y3C7 131 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 COL6A5A8TX70 2615 aa14.73□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SYNGR3O43761 229 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SNAP29O95721 258 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 QDPRP09417 244 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NR2C1P13056 603 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MDH1P40925 334 aaKnown RBP14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 OR1E2P47887 323 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PIGFQ07326 219 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MELKQ14680 651 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CHRFAM7AQ494W8 412 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ANKDD1AQ495B1 522 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LRRC23Q53EV4 343 aaPredicted RBP14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ARMC4Q5T2S8 1044 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 KRT80Q6KB66 452 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SLC15A3Q8IY34 581 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 OFCC1Q8IZS5 231 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF786Q8N393 782 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MCHR2Q969V1 340 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RCN3Q96D15 328 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NMD3Q96D46 503 aaKnown RBP14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 INIPQ9NRY2 104 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LPAR3Q9UBY5 353 aa14.72□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SLC22A23A1A5C7 686 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CCDC22O60826 627 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 STAMBPO95630 424 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 IGHMP01871 453 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TACSTD2P09758 323 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 COX4I1P13073 169 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ACADSP16219 412 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF23P17027 643 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 IFNA8P32881 189 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 THBS2P35442 1172 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CLRN1P58418 232 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MRPS34P82930 218 aaKnown RBP14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RUNX1T1Q06455 604 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MSMPQ1L6U9 139 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SLC36A2Q495M3 483 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PODNL1Q6PEZ8 512 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CDK20Q8IZL9 346 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FAM156AQ8NDB6 213 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FGFBP3Q8TAT2 258 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FNDC8Q8TC99 324 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FOXN4Q96NZ1 517 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MDFIQ99750 246 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MRPL37Q9BZE1 423 aaKnown RBP14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TXNIPQ9H3M7 391 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MS4A5Q9H3V2 200 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ARMCX1Q9P291 453 aa14.71□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MCIDASD6RGH6 385 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 NDUFAB1O14561 156 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 TRMUO75648 421 aaKnown RBP14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PTHP01270 115 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IFNA2P01563 188 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FAM157CP0CG43 387 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 DAOP14920 347 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LSP1P33241 339 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 AQP2P41181 271 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF84P51523 738 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 GALK2Q01415 458 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RIN1Q13671 783 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RAB39AQ14964 217 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms