RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PDLIM7Q9NR12 457 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 LPAR3Q9UBY5 353 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PCDHGA1Q9Y5H4 931 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TRBV4-1A0A0J9YWV2 114 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 NPIPB9F8W1W9 429 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 M0R082 166 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CRYBA1P05813 215 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR13C7P0DN81 318 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MMP11P24347 488 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TACR1P25103 407 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ADCYAP1R1P41586 468 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CASP9P55211 416 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TAS2R45P59539 299 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FOXK2Q01167 660 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SLC9A3R2Q15599 337 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 BEX5Q5H9J7 111 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SLC16A13Q7RTY0 426 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CLEC1AQ8NC01 280 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR6K2Q8NGY2 324 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZCCHC10Q8TBK6 192 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF596Q8TC21 504 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PPP1R1CQ8WVI7 109 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ASB11Q8WXH4 323 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SEC22AQ96IW7 307 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TXNDC17Q9BRA2 123 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MFSD2BA6NFX1 497 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 VSTM2BA6NLU5 285 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CD1AP06126 327 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PRR35P0CG20 571 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PGA3P0DJD8 388 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ACVRL1P37023 503 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 DGKEP52429 567 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FKBP1BP68106 108 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF90Q03938 601 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 IL13RA2Q14627 380 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MLC1Q15049 377 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CDK5R1Q15078 307 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SLC38A9Q8NBW4 561 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF384Q8TF68 577 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 GAL3ST4Q96RP7 486 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SLC25A18Q9H1K4 315 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 WSB1Q9Y6I7 421 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SOWAHBA6NEL2 793 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MAN2B1O00754 1011 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CD99P14209 185 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ETFDHQ16134 617 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 GUCA2BQ16661 112 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SLC5A12Q1EHB4 618 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MANEAQ5SRI9 462 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TREML2Q5T2D2 321 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FUT10Q6P4F1 479 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ERN2Q76MJ5 926 aaKnown RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CAMKMTQ7Z624 323 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 LRFN3Q9BTN0 628 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SMIM3Q9BZL3 60 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 NMES1Q9C002 83 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 VCX2Q9H322 139 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 B4GALT6Q9UBX8 382 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 GPR34Q9UPC5 381 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FOXJ3Q9UPW0 622 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 DVL1O14640 695 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 MT-ATP6P00846 226 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ATXN1LP0C7T5 689 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ATXN8OSP0DMR3 200 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SLC11A1P49279 550 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HLA-DRB3P79483 266 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TUSC1Q2TAM9 212 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF321PQ8N8H1 164 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 BOLLQ8N9W6 283 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 OR13C9Q8NGT0 318 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PPT2Q9UMR5 302 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PARP4Q9UKK3 1724 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 MYH6P13533 1939 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DCDC2BA2VCK2 349 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 WNT10BO00744 389 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SUSD5O60279 629 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TBX19O60806 448 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HAPLN1P10915 354 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 GABRR1P24046 479 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 KCNJ10P78508 379 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ACY1Q03154 408 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HLA-BQ31612 363 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 NDRG1Q92597 394 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 GPR174Q9BXC1 333 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 BANF2Q9H503 90 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM9BQ9NQ34 198 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PRTFDC1Q9NRG1 225 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CA14Q9ULX7 337 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 MYH11P35749 1972 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TSPAN6O43657 245 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PLRG1O43660 514 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HLA-DQB1P01920 261 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 GAPDHP04406 335 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SERPINA2P20848 420 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 OR1D2P34982 312 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CASRP41180 1078 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms