RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CRYBA2P53672 197 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 PCBP3P57721 371 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ACTR3P61158 418 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ELF3P78545 371 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 MRPS11P82912 194 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 GNA13Q14344 377 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CYBRD1Q53TN4 286 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 OTUD3Q5T2D3 398 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 FAM205BPQ63HN1 556 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 FIP1L1Q6UN15 594 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 LRRC74BQ6ZQY2 392 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 PATL1Q86TB9 770 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 WDFY1Q8IWB7 410 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CDK20Q8IZL9 346 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 FAM86B1Q8N7N1 296 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 SMYD1Q8NB12 490 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ATP6V1C2Q8NEY4 427 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 SLC26A7Q8TE54 656 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 TPD52L3Q96J77 140 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 NPAS1Q99742 590 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF350Q9GZX5 532 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 GORASP2Q9H8Y8 452 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 MOV10Q9HCE1 1003 aaKnown RBP8.29□□□□□ -1.08
CAPN3-216ENST00000567071 BCL2L10Q9HD36 194 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 OBP2BQ9NPH6 170 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 C1RLQ9NZP8 487 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 CALML5Q9NZT1 146 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 AUP1Q9Y679 476 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 ARHGAP32A7KAX9 2087 aa8.29□□□□□ -1.08
CAPN3-216ENST00000567071 A0A0G2JPF8 293 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 TCRBV5S2A0A599 114 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 TCRBV3S1A0A5B6 114 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HNRNPCL2B2RXH8 293 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HNRNPCL3B7ZW38 293 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 M0QX08 132 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-216ENST00000567071 XPNPEP2O43895 674 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HPXP02790 462 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HNRNPCL4P0DMR1 293 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 THBS4P35443 961 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 NAAAQ02083 359 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 MVKQ03426 396 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 MTX3Q5HYI7 312 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 DEFB121Q5J5C9 76 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 PRAMEF8Q5VWM4 474 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 PRAMEF7Q5VXH5 474 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 CCDC80Q76M96 950 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 VTCN1Q7Z7D3 282 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 VRK2Q86Y07 508 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 KRT73Q86Y46 540 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 ARMC8Q8IUR7 673 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF614Q8N883 585 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 PYDC1Q8WXC3 89 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 ZG16BQ96DA0 208 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 SLC47A1Q96FL8 570 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-216ENST00000567071 HSH2DQ96JZ2 352 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 ZNF607Q96SK3 696 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 SEPHS2Q99611 448 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 MRI1Q9BV20 369 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 COQ10BQ9H8M1 238 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 CACYBPQ9HB71 228 aaKnown RBP8.28□□□□□ -1.08
CAPN3-216ENST00000567071 REV1Q9UBZ9 1251 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 RPS6KA6Q9UK32 745 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 CMAHPQ9Y471 501 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-216ENST00000567071 DSPPQ9NZW4 1301 aa8.28□□□□□ -1.08
CAPN3-216ENST00000567071 STAB2Q8WWQ8 2551 aa8.27□□□□□ -1.08
CAPN3-216ENST00000567071 DHRS12A0PJE2 317 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 AQP12BA6NM10 295 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 TPST1O60507 370 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 DEAF1O75398 565 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-216ENST00000567071 SERPINB7O75635 380 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 KRT36O76013 467 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 MFN2O95140 757 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 NUDT14O95848 222 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 IFNA14P01570 189 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 IGHV2-5P01817 119 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 MT-ND1P03886 318 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 ETS2P15036 469 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 HPGDP15428 266 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 TNFRSF1BP20333 461 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 CD247P20963 164 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 RAD52P43351 418 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 UBE2NP61088 152 aaKnown RBP8.27□□□□□ -1.09
CAPN3-216ENST00000567071 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
CAPN3-216ENST00000567071 LCN2P80188 198 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 FOXF1Q12946 379 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 MAPK14Q16539 360 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 GRAMD1BQ3KR37 738 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 PDZK1Q5T2W1 519 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 ZNF836Q6ZNA1 936 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 COMTD1Q86VU5 262 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 MISPQ8IVT2 679 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 AQP12AQ8IXF9 295 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 PEX5LQ8IYB4 626 aa8.27□□□□□ -1.09
CAPN3-216ENST00000567071 ADGRG5Q8IZF4 528 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms