RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MAN2C1Q9NTJ4 1040 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
FANCA-220ENST00000566409 J3KTA2 159 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 hCG_2039718K7EN88 272 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 DHHO43323 396 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 CCDC22O60826 627 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 SLC25A16P16260 332 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 GSK3BP49841 420 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 PPOXP50336 477 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 SEC24CP53992 1094 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 SNTB2Q13425 540 aaKnown RBP12.64□□□□□ -0.39
FANCA-220ENST00000566409 FHL1Q13642 323 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 RAB39AQ14964 217 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 SPATA21Q7Z572 469 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 TSEN54Q7Z6J9 526 aaKnown RBP12.64□□□□□ -0.39
FANCA-220ENST00000566409 MEX3DQ86XN8 651 aaKnown RBP12.64□□□□□ -0.39
FANCA-220ENST00000566409 CDK20Q8IZL9 346 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 SYT14Q8NB59 555 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
FANCA-220ENST00000566409 PRRC1Q96M27 445 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 MYLK2Q9H1R3 596 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
FANCA-220ENST00000566409 YAE1D1Q9NRH1 226 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
FANCA-220ENST00000566409 A0A1W2PRG6 482 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 CXCR6O00574 342 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 TLX2O43763 284 aaPredicted RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 TRMUO75648 421 aaKnown RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 UBL3O95164 117 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 IGHG1P01857 330 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 TP53P04637 393 aaPredicted RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 OR8G3PP0DMU2 310 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 MAKP20794 623 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 ZNF133P52736 654 aaPredicted RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 VLDLRP98155 873 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 ST3GAL3Q11203 375 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 FXNQ16595 210 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 CBLL1Q75N03 491 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 ARPINQ7Z6K5 226 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 OR4K5Q8NGD3 323 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 FOXN4Q96NZ1 517 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 HOPXQ9BPY8 73 aaPredicted RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 MRPL37Q9BZE1 423 aaKnown RBP12.63□□□□□ -0.39
FANCA-220ENST00000566409 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 AP3M1Q9Y2T2 418 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 STAB1Q9NY15 2570 aa12.63□□□□□ -0.39
FANCA-220ENST00000566409 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 SH3PXD2BA1X283 911 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 PRSS23O95084 383 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 RAB36O95755 333 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 SERPINA5P05154 406 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 CSF3P09919 207 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 IFI30P13284 250 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 ACADSP16219 412 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 NR4A2P43354 598 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 PDLIM4P50479 330 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 CLRN1P58418 232 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 HACD2Q6Y1H2 254 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 OFCC1Q8IZS5 231 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 PAQR4Q8N4S7 273 aaPredicted RBP12.62□□□□□ -0.39
FANCA-220ENST00000566409 LRRC75AQ8NAA5 344 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
FANCA-220ENST00000566409 NOXO1Q8NFA2 376 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 HDAC2Q92769 488 aaKnown RBP12.62□□□□□ -0.39
FANCA-220ENST00000566409 BPIFA2Q96DR5 249 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 ABCD2Q9UBJ2 740 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 HIF3AQ9Y2N7 669 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 UGT2A1Q9Y4X1 527 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 FKBP7Q9Y680 259 aa12.62□□□□□ -0.39
FANCA-220ENST00000566409 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 SLC2A10O95528 541 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 ZNF682O95780 498 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 SERPINA1P01009 418 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 IFNW1P05000 195 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 ADRA2AP08913 450 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
FANCA-220ENST00000566409 IGHV4-31P0DP07 118 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 CCL2P13500 99 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 NCK1P16333 377 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
FANCA-220ENST00000566409 GLRXP35754 106 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 NUDT2P50583 147 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 FMODQ06828 376 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 TBPL2Q6SJ96 375 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 NRMQ8IXM6 262 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 MRPL24Q96A35 216 aaKnown RBP12.61□□□□□ -0.39
FANCA-220ENST00000566409 HSH2DQ96JZ2 352 aa12.61□□□□□ -0.39
FANCA-220ENST00000566409 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms