RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SULT1C4O75897 302 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 IGHG1P01857 330 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 NME2P22392 152 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 SHC1P29353 583 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 CD79BP40259 229 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 GPR85P60893 370 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 LCN6P62502 163 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 FOXK1P85037 733 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 EGR3Q06889 387 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 DOC2BQ14184 412 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 MELKQ14680 651 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 MOGQ16653 247 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 RPL22L1Q6P5R6 122 aaKnown RBP13.92□□□□□ -0.18
COMMD4-210ENST00000564587 NHLRC1Q6VVB1 395 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 FAM220AQ7Z4H9 259 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 YRDCQ86U90 279 aaKnown RBP13.92□□□□□ -0.18
COMMD4-210ENST00000564587 CDC20BQ86Y33 519 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 SULF2Q8IWU5 870 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 MS4A15Q8N5U1 240 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 ZNF511Q8NB15 262 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 TMEM178AQ8NBL3 297 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 ZNRF4Q8WWF5 429 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 SLC25A44Q96H78 314 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-210ENST00000564587 KCTD7Q96MP8 289 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 TSSK2Q96PF2 358 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 KCNN2Q9H2S1 579 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 MMP27Q9H306 513 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 ISG20L2Q9H9L3 353 aaKnown RBP13.92□□□□□ -0.18
COMMD4-210ENST00000564587 KLHL9Q9P2J3 617 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 KLHL13Q9P2N7 655 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
COMMD4-210ENST00000564587 DCTN6O00399 190 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 NKX2-8O15522 239 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 OGG1O15527 345 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 LALBAP00709 142 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 SERPINA3P01011 423 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 HRGP04196 525 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 TGM4P49221 684 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 BIDP55957 195 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 OR12D2P58182 307 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 RPS3AP61247 264 aaKnown RBP13.91□□□□□ -0.18
COMMD4-210ENST00000564587 ARG2P78540 354 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 CDC20Q12834 499 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 CLN3Q13286 438 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 KDM8Q8N371 416 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 TBC1D15Q8TC07 691 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 MED18Q9BUE0 208 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 RERGLQ9H628 205 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 ZNF703Q9H7S9 590 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-210ENST00000564587 TXNL4BQ9NX01 149 aaKnown RBP13.91□□□□□ -0.18
COMMD4-210ENST00000564587 CHD6Q8TD26 2715 aa13.91□□□□□ -0.18
COMMD4-210ENST00000564587 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 A0A0J9YW62 118 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 METTL15A6NJ78 407 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 FAM171A2A8MVW0 826 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 TRAF3IP2O43734 574 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 GPRIN2O60269 458 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 TMCC2O75069 709 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 RGS9O75916 674 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 IL1AP01583 271 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 OPN1LWP04000 364 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 KRT8P05787 483 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 RFPL3SP0C7P2 107 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 CTLA4P16410 223 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ZNF823P16415 610 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 POU3F2P20265 443 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ALOX5APP20292 161 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ENPP1P22413 925 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 CARD18P57730 90 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 CLRN1P58418 232 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 RPS25P62851 125 aaKnown RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 SIRPAP78324 504 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 PLGLB1Q02325 96 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ZNF404Q494X3 552 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 TEX30Q5JUR7 227 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 KCTD18Q6PI47 426 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 GPAT4Q86UL3 456 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 OR6N2Q8NGY6 317 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 OR2V1Q8NHB1 315 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 OTOSQ8NHW6 89 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 PNPLA2Q96AD5 504 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 INTS12Q96CB8 462 aaKnown RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 SCMH1Q96GD3 660 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 TTYH2Q9BSA4 534 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 MFRPQ9BY79 579 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 MRPL13Q9BYD1 178 aaKnown RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ZNF552Q9H707 407 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 PAQR5Q9NXK6 330 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-210ENST00000564587 PLA2G3Q9NZ20 509 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
COMMD4-210ENST00000564587 PINLYPA6NC86 204 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 A6NL46 340 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 NPIPA2E9PIF3 369 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 NPIPA3F8WFD2 350 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms