RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GGNQ86UU5 652 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 FOXN4Q96NZ1 517 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 WDR76Q9H967 626 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 NCKAP5O14513 1909 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 IGHV3-15A0A0B4J1V0 119 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 LOC102725191A0A1B0GVB3 256 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 GJE1A6NN92 205 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 FAM166BA8MTA8 275 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 E9PI62 339 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 AKAP8O43823 692 aaKnown RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 HPNP05981 417 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 PSMA1P25786 263 aaKnown RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 CD97P48960 835 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 MEOX1P50221 254 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 SUCLG1P53597 346 aaKnown RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 RPS25P62851 125 aaKnown RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 OTPQ5XKR4 325 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 TMEM203Q969S6 136 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 UCN2Q96RP3 112 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 SRXN1Q9BYN0 137 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 KLF13Q9Y2Y9 288 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-208ENST00000563220 CSAG2Q9Y5P2 127 aa16.12■□□□□ 0.17
COMMD4-208ENST00000563220 IGKV1D-43A0A0B4J1Z2 117 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 SEC14L5O43304 696 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 GLSO94925 669 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-208ENST00000563220 MT-ND5P03915 603 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 CD46P15529 392 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 CELP19835 753 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 MAGEA5P43359 124 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 CLDN15P56746 228 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 CSNK2A1P68400 391 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-208ENST00000563220 FMODQ06828 376 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 TIMM50Q3ZCQ8 353 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 FAM205BPQ63HN1 556 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 VASNQ6EMK4 673 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 VASH1Q7L8A9 365 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-208ENST00000563220 TMEM251Q8N6I4 163 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 DYNC2LI1Q8TCX1 351 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 ZHX1-C8orf76Q96EF9 292 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 ADGRG7Q96K78 797 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 MFRPQ9BY79 579 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 MRPL13Q9BYD1 178 aaKnown RBP16.11■□□□□ 0.17
COMMD4-208ENST00000563220 MARCH7Q9H992 704 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 KLHL13Q9P2N7 655 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 B4GALT7Q9UBV7 327 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 STUB1Q9UNE7 303 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 FREM3P0C091 2139 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
COMMD4-208ENST00000563220 hCG_2014768A0A024R1R8 64 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 PRR32B1ATL7 298 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 KLRC4-KLRK1H3BQV0 150 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 EIF1AYO14602 144 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 EIF1BO60739 113 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 PSKH1P11801 424 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF43P17038 809 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 ENPP1P22413 925 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 UGT2B10P36537 528 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 RPS27P42677 84 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 AGFG1P52594 562 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 BDH1Q02338 343 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 CDONQ4KMG0 1287 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 TP53I3Q53FA7 332 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 CDC20BQ86Y33 519 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 SCMH1Q96GD3 660 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 TM9SF2Q99805 663 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 DCSTAMPQ9H295 470 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 EXOSC4Q9NPD3 245 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 MRPL22Q9NWU5 206 aaKnown RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 RASD1Q9Y272 281 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 COA3Q9Y2R0 106 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 KLHDC2Q9Y2U9 406 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 SLC35F4A4IF30 521 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 CRABP1P29762 137 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 RANBP1P43487 201 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 CENPAP49450 140 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 RAC3P60763 192 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 PLGLB1Q02325 96 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF766Q5HY98 468 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-208ENST00000563220 SNX33Q8WV41 574 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 INTS14Q96SY0 518 aa16.1■□□□□ 0.17
COMMD4-208ENST00000563220 AKAP13Q12802 2813 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF670-ZNF695F2Z2N8 137 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 KLK10O43240 276 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 TLX3O43711 291 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-208ENST00000563220 POU3F2P20265 443 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-208ENST00000563220 TNFSF10P50591 281 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 CARD18P57730 90 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 CAMK2DQ13557 499 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 ZNF846Q147U1 533 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 HBMQ6B0K9 141 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 C16orf87Q6PH81 154 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 IGFL2Q6UWQ7 119 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 RPTNQ6XPR3 784 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 GDPGP1Q6ZNW5 385 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 ESPNLQ6ZVH7 1005 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 DPY19L4Q7Z388 723 aa16.09■□□□□ 0.17
COMMD4-208ENST00000563220 SYS1Q8N2H4 156 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms