RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 OR5M10Q6IEU7 315 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 RBM45Q8IUH3 476 aaKnown RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 C17orf47Q8NEP4 570 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 M1APQ8TC57 530 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 FOXRED1Q96CU9 486 aaPredicted RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 ZNF681Q96N22 645 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 POTEKPQ9BYX7 375 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 OR10A2Q9H208 303 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 SLC6A13Q9NSD5 602 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 PIKFYVEQ9Y2I7 2098 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 IGHV5-10-1A0A0J9YXX1 117 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 FADS1O60427 444 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 ATE1O95260 518 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SMIM6P0DI80 62 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SERPINF1P36955 418 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 C22orf42Q6IC83 251 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 DHRS13Q6UX07 377 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 ANKRD9Q96BM1 317 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SEMA4CQ9C0C4 833 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 C1orf198Q9H425 327 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 WDR76Q9H967 626 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 C19orf12Q9NSK7 152 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 LRFN1Q9P244 771 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 TCRBV16S1A1N1A0A5B0 115 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 IL1AP01583 271 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 APEHP13798 732 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 PTPN6P29350 595 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 GABREP78334 506 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SRYQ05066 204 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 PWWP2BQ6NUJ5 590 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 CD300LDQ6UXZ3 194 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 LINC00696Q6ZRV3 163 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 TMPRSS11FQ6ZWK6 438 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SEMA6DQ8NFY4 1073 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 TERB2Q8NHR7 220 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 FAM131CQ96AQ9 280 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 C8orf44Q96CB5 159 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 BCL2L14Q9BZR8 327 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 ISYNA1Q9NPH2 558 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 KLHL9Q9P2J3 617 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 NDRG3Q9UGV2 375 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 PCDHGA6Q9Y5G7 932 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SYT7O43581 403 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 UPK1BO75841 260 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SCO1O75880 301 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 HPP00738 406 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 RLN1P04808 185 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 MYF5P13349 255 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 POLR2IP36954 125 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 DIO1P49895 249 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 MZT1Q08AG7 82 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 EBPQ15125 230 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 HBMQ6B0K9 141 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 LINC00299Q6ZSB3 139 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 PRSS41Q7RTY9 318 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 TOMM5Q8N4H5 51 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 OR6Q1Q8NGQ2 317 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SPRYD4Q8WW59 207 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 DPCDQ9BVM2 203 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 LHX9Q9NQ69 397 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 P4HTMQ9NXG6 502 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 CES1P1Q9UKY3 287 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 NOP16Q9Y3C1 178 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 A0A087WUJ7 227 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 H3BMQ9 156 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 ADAM11O75078 769 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 OR2J2O76002 312 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 MRPS10P82664 201 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 RNASE12Q5GAN4 147 aaKnown RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 HES3Q5TGS1 186 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 DESI1Q6ICB0 168 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 HEPHL1Q6MZM0 1159 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 OR51L1Q8NGJ5 315 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 OR5L1Q8NGL2 311 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 OR13C3Q8NGS6 347 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 SARAFQ96BY9 339 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 ZNF501Q96CX3 271 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 ZNF587Q96SQ5 575 aaPredicted RBP6.89□□□□□ -1.31
TCF4-216ENST00000562680 TREM1Q9NP99 234 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 PLEK2Q9NYT0 353 aa6.89□□□□□ -1.31
TCF4-216ENST00000562680 CNTRLQ7Z7A1 2325 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 A0A0B4J2E0 115 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 A0A1B0GX12 115 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 MKRN2OSH3BPM6 223 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 PRSS23O95084 383 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 F13BP05160 661 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 GUSBP08236 651 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 FGF5P12034 268 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ABCD3P28288 659 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SDHAP31040 664 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 EIF2S3P41091 472 aaKnown RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 MAN2A2P49641 1150 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZNF81P51508 661 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ECH1Q13011 328 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms