RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ARIH2OSQ8N7S6 290 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 SYT14Q8NB59 555 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 FNDC8Q8TC99 324 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 UTP4Q969X6 686 aaKnown RBP14.61□□□□□ -0.07
CLK3-207ENST00000562389 ZNF570Q96NI8 536 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 OR52D1Q9H346 318 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 SMURF2Q9HAU4 748 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 MOV10Q9HCE1 1003 aaKnown RBP14.61□□□□□ -0.07
CLK3-207ENST00000562389 GRHPRQ9UBQ7 328 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 ADAM18Q9Y3Q7 739 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 RNF115Q9Y4L5 304 aa14.61□□□□□ -0.07
CLK3-207ENST00000562389 ABCA12Q86UK0 2595 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 APCP25054 2843 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 ARRDC5A6NEK1 342 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 GNGT2O14610 69 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 CIB2O75838 187 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 B4GALT1P15291 398 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 PTAFRP25105 342 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 SDHAP31040 664 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 ERFP50548 548 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 ZNF83P51522 516 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 MYBPC1Q00872 1141 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 CD47Q08722 323 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 RFX4Q33E94 735 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 C3orf36Q3SXR2 165 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 NRN1LQ496H8 165 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 MESTQ5EB52 335 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 GPR139Q6DWJ6 353 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 ZNF620Q6ZNG0 422 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 CDH24Q86UP0 819 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 FAM169BQ8N8A8 192 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 NRGNQ92686 78 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 Q96M85 177 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 DGCR6LQ9BY27 220 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 TMEM38BQ9NVV0 291 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 CRNNQ9UBG3 495 aaPredicted RBP14.6□□□□□ -0.07
CLK3-207ENST00000562389 MGAT4BQ9UQ53 548 aa14.6□□□□□ -0.07
CLK3-207ENST00000562389 ITPR2Q14571 2701 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 M0R1B8 84 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 AHCYL1O43865 530 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 ENTPD5O75356 428 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 TXNDC12O95881 172 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 PLAUP00749 431 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 GASTP01350 101 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 APEHP13798 732 aaKnown RBP14.59□□□□□ -0.07
CLK3-207ENST00000562389 CD40P25942 277 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 SLC6A6P31641 620 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 ZNF84P51523 738 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 RPS6KA3P51812 740 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 TUBA1BP68363 451 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 TUBA4AP68366 448 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 CCNIQ14094 377 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 THEM4Q5T1C6 240 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 RPL13AP3Q6NVV1 102 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 ADAM5Q6NVV9 412 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 SLC25A47Q6Q0C1 308 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 PAMR1Q6UXH9 720 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 TUBA1AQ71U36 451 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 AQP11Q8NBQ7 271 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 OR10G2Q8NGC3 310 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 NANOS1Q8WY41 292 aaKnown RBP14.59□□□□□ -0.07
CLK3-207ENST00000562389 NINJ1Q92982 152 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 DUS3LQ96G46 650 aaKnown RBP14.59□□□□□ -0.07
CLK3-207ENST00000562389 C1QTNF6Q9BXI9 259 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 DNAJB9Q9UBS3 223 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 IL20RAQ9UHF4 553 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 EDARQ9UNE0 448 aa14.59□□□□□ -0.07
CLK3-207ENST00000562389 IGKV1D-43A0A0B4J1Z2 117 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 TEX13CA0A0J9YWL9 993 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ZNF503-AS2A6NEH8 195 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 XKRYO14609 159 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ABCD4O14678 606 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 IMPA2O14732 288 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ARHGEF9O43307 516 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 SLC2A10O95528 541 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 IGKV3-15P01624 115 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 CBR1P16152 277 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 GSTM3P21266 225 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 IST1P53990 364 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 FMODQ06828 376 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 KRR1Q13601 381 aaKnown RBP14.58□□□□□ -0.08
CLK3-207ENST00000562389 RASSF6Q6ZTQ3 369 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 TMEM179BQ7Z7N9 219 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ADCK1Q86TW2 530 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 SLC22A24Q8N4F4 322 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 CLDN22Q8N7P3 220 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 GIPC3Q8TF64 312 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 RASD2Q96D21 266 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 RADILQ96JH8 1075 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 SAMD8Q96LT4 415 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 SLC38A2Q96QD8 506 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 RBP7Q96R05 134 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 LIME1Q9H400 295 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ARMC1Q9NVT9 282 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 B3GNT2Q9NY97 397 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ZNF224Q9NZL3 707 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 ST6GALNAC2Q9UJ37 374 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 IER3IP1Q9Y5U9 82 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 CDH10Q9Y6N8 788 aa14.58□□□□□ -0.08
CLK3-207ENST00000562389 CADP27708 2225 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms