RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ZNF83P51522 516 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 GLO1Q04760 184 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 NPRL3Q12980 569 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 CCNIQ14094 377 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 DAZAP2Q15038 168 aaPredicted RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 GABRA6Q16445 453 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 GSG1Q2KHT4 349 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 CLDN22Q8N7P3 220 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 ZNF555Q8NEP9 628 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 OR52E2Q8NGJ4 325 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 OR2T4Q8NH00 348 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 LRTOMTQ8WZ04 291 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 TMEM54Q969K7 222 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 C14orf79Q96F83 325 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 Q96M85 177 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 MUS81Q96NY9 551 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 C1QTNF6Q9BXI9 259 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 CLEC4MQ9H2X3 399 aaPredicted RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 VCX3BQ9H321 246 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 C1orf198Q9H425 327 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 SRA1Q9HD15 236 aaKnown RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 SLC17A5Q9NRA2 495 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 B3GAT1Q9P2W7 334 aa9.43□□□□□ -0.9
TPM1-229ENST00000561242 ING1Q9UK53 422 aaPredicted RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 TLN1Q9Y490 2541 aaKnown RBP9.43□□□□□ -0.9
TPM1-229ENST00000561242 SVILO95425 2214 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SLC22A23A1A5C7 686 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PRSS37A4D1T9 235 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SAC3D1A6NKF1 404 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SNTNA6NMZ2 147 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SOX14O95416 240 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 IGHMP01871 453 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 ERCC1P07992 297 aaPredicted RBP9.42□□□□□ -0.9
TPM1-229ENST00000561242 RNF224P0DH78 156 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PGA4P0DJD7 388 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PGA3P0DJD8 388 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 COX5AP20674 150 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PRKACGP22612 351 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 CRYGSP22914 178 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 IGFBP5P24593 272 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PTDSS1P48651 473 aaKnown RBP9.42□□□□□ -0.9
TPM1-229ENST00000561242 RPS7P62081 194 aaKnown RBP9.42□□□□□ -0.9
TPM1-229ENST00000561242 ESRRGP62508 458 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 TFF3Q07654 80 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.42□□□□□ -0.9
TPM1-229ENST00000561242 CDSNQ15517 529 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 TAF13Q15543 124 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SNAPC1Q16533 368 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 TBRG1Q3YBR2 411 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 ZNF620Q6ZNG0 422 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 ZBTB49Q6ZSB9 765 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 GLB1L2Q8IW92 636 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 LRRC18Q8N456 261 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SLC22A24Q8N4F4 322 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PROKR2Q8NFJ6 384 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 OR4K13Q8NH42 304 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 DUS3LQ96G46 650 aaKnown RBP9.42□□□□□ -0.9
TPM1-229ENST00000561242 PLPPR2Q96GM1 343 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 WACQ9BTA9 647 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 EGLN3Q9H6Z9 239 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 SIAEQ9HAT2 523 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 CDH20Q9HBT6 801 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 S100A14Q9HCY8 104 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 NRIP3Q9NQ35 241 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 IMPAD1Q9NX62 359 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 ATP23Q9Y6H3 246 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 LAMA5O15230 3695 aa9.42□□□□□ -0.9
TPM1-229ENST00000561242 PRR23D1E9PI22 279 aaPredicted RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 ARPC3O15145 178 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 FZD7O75084 574 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZNF432O94892 652 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 PRR23D2P0DMB1 279 aaPredicted RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 B4GALT1P15291 398 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 MSR1P21757 451 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 DNASE1P24855 282 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 LAP3P28838 519 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 FMO3P31513 532 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ATP6V1E1P36543 226 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 LIMS1P48059 325 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 RAB1AP62820 205 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 PIGFQ07326 219 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 SCRN3Q0VDG4 424 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 KEAP1Q14145 624 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 GINS1Q14691 196 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 TAB1Q15750 504 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 NRN1LQ496H8 165 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 HIKESHIQ53FT3 197 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ARMC4Q5T2S8 1044 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZNF787Q6DD87 383 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 TSEN54Q7Z6J9 526 aaKnown RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
TPM1-229ENST00000561242 TMEM123Q8N131 208 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 OR4C15Q8NGM1 316 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 TSPAN32Q96QS1 320 aa9.41□□□□□ -0.9
TPM1-229ENST00000561242 GPX7Q96SL4 187 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms