RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, human

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIF1-208	ENST00000560444	TCEA1	P23193	301 aa	Known RBP	21.31	■■□□□ 1
PIF1-208	ENST00000560444	P2RY4	P51582	365 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	GLO1	Q04760	184 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	INSL4	Q14641	139 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	ACSM3	Q53FZ2	586 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	HDDC2	Q7Z4H3	204 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	CEACAM19	Q7Z692	300 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	TPRA1	Q86W33	373 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	UEVLD	Q8IX04	471 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	BEST3	Q8N1M1	668 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	OTOS	Q8NHW6	89 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	PHYHIP	Q92561	330 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	NKD1	Q969G9	470 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	OXGR1	Q96P68	337 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	UBL7	Q96S82	380 aa	Predicted RBP	21.31	■■□□□ 1
PIF1-208	ENST00000560444	TMEM185B	Q9H7F4	350 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	MRPS18C	Q9Y3D5	142 aa	Known RBP	21.31	■■□□□ 1
PIF1-208	ENST00000560444	SDK2	Q58EX2	2172 aa		21.31	■■□□□ 1
PIF1-208	ENST00000560444	LOC110117498-PIK3R3	F6TDL0	507 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	SULT2B1	O00204	365 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	ZNF593	O00488	134 aa	Predicted RBP	21.3	■■□□□ 1
PIF1-208	ENST00000560444	GATB	O75879	557 aa	Known RBP	21.3	■■□□□ 1
PIF1-208	ENST00000560444	SLC34A2	O95436	690 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	SRD5A2	P31213	254 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	TNFSF8	P32971	234 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	DCAF10	Q5QP82	559 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	DPY19L4	Q7Z388	723 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	PARP16	Q8N5Y8	322 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	SLC30A2	Q9BRI3	323 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	ABI3	Q9P2A4	366 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	MRM2	Q9UI43	246 aa	Known RBP	21.3	■■□□□ 1
PIF1-208	ENST00000560444	CMAHP	Q9Y471	501 aa		21.3	■■□□□ 1
PIF1-208	ENST00000560444	MRPS18B	Q9Y676	258 aa	Known RBP	21.3	■■□□□ 1
PIF1-208	ENST00000560444		A0A1W2PNR3	127 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	GJE1	A6NN92	205 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	RGS5	O15539	181 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	SFTPD	P35247	375 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	PTGS2	P35354	604 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	AIMP2	Q13155	320 aa	Known RBP	21.29	■■□□□ 1
PIF1-208	ENST00000560444	RGS21	Q2M5E4	152 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	RAET1L	Q5VY80	246 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	TMEM225	Q6GV28	225 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	TRIL	Q7L0X0	811 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	ZNF454	Q8N9F8	522 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	ANKRD10	Q9NXR5	420 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	KLHL13	Q9P2N7	655 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	KLHDC2	Q9Y2U9	406 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	PCNX2	A6NKB5	2137 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	OR2M5	A3KFT3	312 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	AQP7P3	A6NL99	342 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444		G3V3Y1	287 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	CDK2AP1	O14519	115 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	EIF1B	O60739	113 aa	Known RBP	21.29	■■□□□ 1
PIF1-208	ENST00000560444	OPN1LW	P04000	364 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	CNR1	P21554	472 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	CALR	P27797	417 aa	Known RBP	21.29	■■□□□ 1
PIF1-208	ENST00000560444	SHC1	P29353	583 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	RAC1	P63000	192 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	C19orf57	Q0VDD7	668 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	ABHD17B	Q5VST6	288 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	SLC18B1	Q6NT16	456 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	IL22RA1	Q8N6P7	574 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	YIPF7	Q8N8F6	280 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	THEM6	Q8WUY1	208 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	TXNDC15	Q96J42	360 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	FER1L6-AS2	Q96M78	137 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	RBP7	Q96R05	134 aa		21.29	■■□□□ 1
PIF1-208	ENST00000560444	ZNF292	O60281	2723 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	PRR32	B1ATL7	298 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	KHDRBS3	O75525	346 aa	Known RBP	21.28	■■□□□ 1
PIF1-208	ENST00000560444	UPK3A	O75631	287 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	ABHD16A	O95870	558 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	MYL9	P24844	172 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	PSMB10	P40306	273 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	CASR	P41180	1078 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	DNASE1L1	P49184	302 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	BID	P55957	195 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	GABRE	P78334	506 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	LIPN	Q5VXI9	398 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	ZNF227	Q86WZ6	799 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	CCDC86	Q9H6F5	360 aa	Known RBP	21.28	■■□□□ 1
PIF1-208	ENST00000560444	MRPL22	Q9NWU5	206 aa	Known RBP	21.28	■■□□□ 1
PIF1-208	ENST00000560444	MED29	Q9NX70	200 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	RASD1	Q9Y272	281 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	COA3	Q9Y2R0	106 aa	Predicted RBP	21.28	■■□□□ 1
PIF1-208	ENST00000560444	ZNF281	Q9Y2X9	895 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	UGT2A1	Q9Y4X1	527 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	CPAMD8	Q8IZJ3	1885 aa		21.28	■■□□□ 1
PIF1-208	ENST00000560444	RIF1	Q5UIP0	2472 aa	Known RBP	21.28	■■□□□ 1
PIF1-208	ENST00000560444	PCSK5	Q92824	1860 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	TRAV1-2	A0A0B4J238	106 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	SHISA3	A0PJX4	238 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	ARL6IP5	O75915	188 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	GPANK1	O95872	356 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	CSRP1	P21291	193 aa	Known RBP	21.27	■■□□□ 1
PIF1-208	ENST00000560444	RBMS1	P29558	406 aa	Known RBP	21.27	■■□□□ 1
PIF1-208	ENST00000560444	OC90	Q02509	493 aa	Predicted RBP	21.27	■■□□□ 1
PIF1-208	ENST00000560444	ETFDH	Q16134	617 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	ZNF181	Q2M3W8	571 aa		21.27	■■□□□ 1
PIF1-208	ENST00000560444	YIF1B	Q5BJH7	314 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms