RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 LGALS3BPQ08380 585 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 SPCS2Q15005 226 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 POU4F3Q15319 338 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 GTF2IRD2BQ6EKJ0 949 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 B3GLCTQ6Y288 498 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 GTF2IRD2Q86UP8 949 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 PM20D2Q8IYS1 436 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 EXD3Q8N9H8 876 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 OR52I1Q8NGK6 324 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 ROBO4Q8WZ75 1007 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 KISS1RQ969F8 398 aaPredicted RBP10.01□□□□□ -0.81
USP3-218ENST00000560202 TMEM80Q96HE8 168 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 ZNF845Q96IR2 970 aaPredicted RBP10.01□□□□□ -0.81
USP3-218ENST00000560202 SF3B5Q9BWJ5 86 aaKnown RBP10.01□□□□□ -0.81
USP3-218ENST00000560202 SYT4Q9H2B2 425 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 TPK1Q9H3S4 243 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 VSX1Q9NZR4 365 aaPredicted RBP10.01□□□□□ -0.81
USP3-218ENST00000560202 TNFRSF10DQ9UBN6 386 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 PCDHGB1Q9Y5G3 927 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
USP3-218ENST00000560202 A0A1B0GVC2 190 aa10□□□□□ -0.81
USP3-218ENST00000560202 SLC22A23A1A5C7 686 aa10□□□□□ -0.81
USP3-218ENST00000560202 APOL3O95236 402 aa10□□□□□ -0.81
USP3-218ENST00000560202 FADS2O95864 444 aaKnown RBP10□□□□□ -0.81
USP3-218ENST00000560202 ADRA2AP08913 450 aa10□□□□□ -0.81
USP3-218ENST00000560202 CPN1P15169 458 aa10□□□□□ -0.81
USP3-218ENST00000560202 ATP6V1E1P36543 226 aa10□□□□□ -0.81
USP3-218ENST00000560202 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
USP3-218ENST00000560202 SLC17A1Q14916 467 aa10□□□□□ -0.81
USP3-218ENST00000560202 PON3Q15166 354 aa10□□□□□ -0.81
USP3-218ENST00000560202 SLC35D3Q5M8T2 416 aa10□□□□□ -0.81
USP3-218ENST00000560202 EEF1A1P5Q5VTE0 462 aa10□□□□□ -0.81
USP3-218ENST00000560202 CREB3L2Q70SY1 520 aa10□□□□□ -0.81
USP3-218ENST00000560202 SIAH3Q8IW03 269 aa10□□□□□ -0.81
USP3-218ENST00000560202 WDFY1Q8IWB7 410 aa10□□□□□ -0.81
USP3-218ENST00000560202 OR6V1Q8N148 313 aa10□□□□□ -0.81
USP3-218ENST00000560202 SVOPQ8N4V2 548 aa10□□□□□ -0.81
USP3-218ENST00000560202 OR9K2Q8NGE7 335 aa10□□□□□ -0.81
USP3-218ENST00000560202 OR51L1Q8NGJ5 315 aa10□□□□□ -0.81
USP3-218ENST00000560202 OR2T4Q8NH00 348 aa10□□□□□ -0.81
USP3-218ENST00000560202 CHAC2Q8WUX2 184 aa10□□□□□ -0.81
USP3-218ENST00000560202 ZNRF4Q8WWF5 429 aa10□□□□□ -0.81
USP3-218ENST00000560202 WDYHV1Q96HA8 205 aa10□□□□□ -0.81
USP3-218ENST00000560202 TSSK2Q96PF2 358 aa10□□□□□ -0.81
USP3-218ENST00000560202 EMC6Q9BV81 110 aa10□□□□□ -0.81
USP3-218ENST00000560202 CDCA4Q9BXL8 241 aa10□□□□□ -0.81
USP3-218ENST00000560202 SP140LQ9H930 580 aa10□□□□□ -0.81
USP3-218ENST00000560202 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
USP3-218ENST00000560202 FGF20Q9NP95 211 aaPredicted RBP10□□□□□ -0.81
USP3-218ENST00000560202 ZNF71Q9NQZ8 489 aaPredicted RBP10□□□□□ -0.81
USP3-218ENST00000560202 PAQR5Q9NXK6 330 aaPredicted RBP10□□□□□ -0.81
USP3-218ENST00000560202 HAO2Q9NYQ3 351 aa10□□□□□ -0.81
USP3-218ENST00000560202 DIMT1Q9UNQ2 313 aaKnown RBP10□□□□□ -0.81
USP3-218ENST00000560202 EXOGQ9Y2C4 368 aaKnown RBP10□□□□□ -0.81
USP3-218ENST00000560202 NCOR2Q9Y618 2525 aa10□□□□□ -0.81
USP3-218ENST00000560202 MGAQ8IWI9 3026 aa10□□□□□ -0.81
USP3-218ENST00000560202 TNRC6AQ8NDV7 1962 aaKnown RBP10□□□□□ -0.81
USP3-218ENST00000560202 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
USP3-218ENST00000560202 MED12Q93074 2177 aa10□□□□□ -0.81
USP3-218ENST00000560202 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 NPIPA2E9PIF3 369 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 NPIPA3F8WFD2 350 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 DCTN6O00399 190 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 WISP2O76076 250 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 GLCEO94923 617 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 RAB36O95755 333 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 FAM87AP0C7U9 286 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 PCMT1P22061 227 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 PYCR1P32322 319 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 MAP2K4P45985 399 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 IRF3Q14653 427 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 NEDD8Q15843 81 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 C3AR1Q16581 482 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 LINC00303Q3SY05 128 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 LCN1P1Q5VSP4 162 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ABLIM2Q6H8Q1 611 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 FCRLAQ7L513 359 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 SHFQ7M4L6 423 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 HDDC2Q7Z4H3 204 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ANKRD13BQ86YJ7 626 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 SYT14Q8NB59 555 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 PROKR2Q8NFJ6 384 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 OR4F15Q8NGB8 312 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 OR51G2Q8NGK0 314 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 OR6X1Q8NH79 312 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 C9orf43Q8TAL5 461 aaPredicted RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 SLC25A44Q96H78 314 aaPredicted RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 ADAD1Q96M93 576 aaKnown RBP9.99□□□□□ -0.81
USP3-218ENST00000560202 KCNK17Q96T54 332 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ARHGAP9Q9BRR9 750 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 NUAK2Q9H093 628 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ACOT13Q9NPJ3 140 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 MOKQ9UQ07 419 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 FKBP7Q9Y680 259 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 IGF2RP11717 2491 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 TMEM8BA6NDV4 472 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZNF726A6NNF4 738 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 ZNF716A6NP11 495 aa9.99□□□□□ -0.81
USP3-218ENST00000560202 FAM171A2A8MVW0 826 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms