RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PUDPQ08623 228 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 TMEM255AQ5JRV8 349 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 FAM209AQ5JX71 171 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 LEG1Q6P5S2 330 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 COMTD1Q86VU5 262 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 NUDCD3Q8IVD9 361 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 MIER2Q8N344 545 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 DNAJA4Q8WW22 397 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 CCL17Q92583 94 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 ELMOD3Q96FG2 381 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 MOGAT1Q96PD6 335 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 SH3GL3Q99963 347 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 NUF2Q9BZD4 464 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 BCL2L14Q9BZR8 327 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 MEAF6Q9HAF1 191 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 MRPL39Q9NYK5 338 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 RPS6KB2Q9UBS0 482 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 LGALS13Q9UHV8 139 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 HAO1Q9UJM8 370 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 PLPP3O14495 311 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 TPD52L2O43399 206 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 FOXH1O75593 365 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 IGHV1-46P01743 117 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 ZCCHC18P0CG32 403 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 CSNK1A1P48729 337 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 MMP15P51511 669 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 ZNF154Q13106 437 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 MOGQ16653 247 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 ARMCX4Q5H9R4 360 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 ALG10BQ5I7T1 473 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 LRFN4Q6PJG9 635 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 ZNF771Q7L3S4 317 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 GLB1L3Q8NCI6 653 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 TMEM38BQ9NVV0 291 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 THUMPD1Q9NXG2 353 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 PDP1Q9P0J1 537 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 GPR45Q9Y5Y3 372 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 AUP1Q9Y679 476 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 TANC2Q9HCD6 1990 aa16.71■□□□□ 0.27
RABGGTA-214ENST00000560163 TM9SF1O15321 606 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 SERPINE1P05121 402 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 ZNF81P51508 661 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 SRSF4Q08170 494 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 PMS2P3Q13401 168 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 PDCD4Q53EL6 469 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 FAM91A1Q658Y4 838 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 ULK3Q6PHR2 472 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 BHLHE22Q8NFJ8 381 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 ST7LQ8TDW4 575 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 VPS33AQ96AX1 596 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 TMIGD2Q96BF3 282 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 PKNOX2Q96KN3 472 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 ASPNQ9BXN1 380 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 C1orf198Q9H425 327 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 CDH20Q9HBT6 801 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 UBAP1Q9NZ09 502 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 GLTPQ9NZD2 209 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 INSIG2Q9Y5U4 225 aa16.7■□□□□ 0.26
RABGGTA-214ENST00000560163 LRRN3E7EW58 273 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 MT-ND5P03915 603 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 NUDT7P0C024 238 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 ZNF12P17014 697 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 BIDP55957 195 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 GTDC1Q4AE62 458 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 OR6X1Q8NH79 312 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
RABGGTA-214ENST00000560163 IGHMP01871 453 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 ADH4P08319 380 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 AHCYP23526 432 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 PRKAR1BP31321 381 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 GLO1Q04760 184 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 SLC3A1Q07837 685 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 TBC1D28Q2M2D7 210 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 SPRNQ5BIV9 151 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 HIST2H2BDQ6DRA6 164 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 C9orf139Q6ZV77 190 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 DPPA2Q7Z7J5 298 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 OR1J2Q8NGS2 313 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 SLC47A1Q96FL8 570 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 EPYCQ99645 322 aa16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 CACYBPQ9HB71 228 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 SOX21Q9Y651 276 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-214ENST00000560163 ISPDA4D126 451 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 WDR91A4D1P6 747 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 SDHDO14521 159 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 SPRY3O43610 288 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 ENTPD5O75356 428 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 PTHP01270 115 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 IGHV2-70P01814 119 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 IL6P05231 212 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 BMP2P12643 396 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 DRD4P21917 467 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 OMGP23515 440 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 SLC6A9P48067 706 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 HNRNPA0Q13151 305 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 TMEM53Q6P2H8 277 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 OR4K5Q8NGD3 323 aa16.67■□□□□ 0.26
RABGGTA-214ENST00000560163 OR1J1Q8NGS3 322 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms