RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CTXN1P60606 82 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 OAFQ86UD1 273 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 FBXL14Q8N1E6 418 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 MUC15Q8N387 334 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 TSPAN32Q96QS1 320 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 KCNS3Q9BQ31 491 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 CACNG6Q9BXT2 260 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 TMEM38BQ9NVV0 291 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 NDE1Q9NXR1 346 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 B3GNT2Q9NY97 397 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF346Q9UL40 294 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 H7C1C5 153 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 SMAD7O15105 426 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 IGHV4-39P01824 125 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 CRYAAP02489 173 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 PAX1P15863 534 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 RHCEP18577 417 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 ACVR1BP36896 505 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 GIPRP48546 466 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 PTDSS1P48651 473 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 MNAT1P51948 309 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 LCN6P62502 163 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 ERVK-25P63136 954 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 SPIBQ01892 262 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 HGFACQ04756 655 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 HIST3H3Q16695 136 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 GSG1Q2KHT4 349 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 AGAP6Q5VW22 663 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 C11orf71Q6IPW1 123 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 RRM2BQ7LG56 351 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 DTX2Q86UW9 622 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 RNF113BQ8IZP6 322 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 SLC22A24Q8N4F4 322 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 OR4K5Q8NGD3 323 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 NSMAFQ92636 917 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 CLPTM1LQ96KA5 538 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 TXNIPQ9H3M7 391 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 FAIMQ9NVQ4 179 aa12.88□□□□□ -0.35
RABGGTA-211ENST00000559850 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 A0A1W2PRQ8 180 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 H7C1Q1 480 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 CALB2P22676 271 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 CDAP32320 146 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ARR3P36575 388 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 SLC9A3P48764 834 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 RPL27P61353 136 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 RAB1AP62820 205 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 CD47Q08722 323 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 DGCR6Q14129 220 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 RAB39AQ14964 217 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 TMPRSS11FQ6ZWK6 438 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF627Q7L945 461 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 CDK20Q8IZL9 346 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 FBXO17Q96EF6 278 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 GPA33Q99795 319 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 FUZQ9BT04 418 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 CBLN4Q9NTU7 201 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 IL20RAQ9UHF4 553 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ADAM18Q9Y3Q7 739 aa12.87□□□□□ -0.35
RABGGTA-211ENST00000559850 ACANP16112 2415 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 UBOX5O94941 541 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 GADD45GO95257 159 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 FABP3P05413 133 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF14P17017 642 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 APOBEC3AP31941 199 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 THBS4P35443 961 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 OMPP47874 163 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 LIMS1P48059 325 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF84P51523 738 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 MS4A2Q01362 244 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 MST1LQ2TV78 715 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 ZBED5Q49AG3 693 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF544Q6NX49 715 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 Q71RC1 249 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 PIWIL3Q7Z3Z3 882 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 LRRC18Q8N456 261 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 NANOS1Q8WY41 292 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 NMD3Q96D46 503 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 Q96M85 177 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 CA10Q9NS85 328 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 UGT2A1Q9Y4X1 527 aa12.86□□□□□ -0.35
RABGGTA-211ENST00000559850 TCRBV5S2A0A599 114 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms