RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SERPINF1P36955 418 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 GIPRP48546 466 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 CTXN1P60606 82 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 RAB1AP62820 205 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 LSM11P83369 360 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX1-207ENST00000559401 GALK2Q01415 458 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 RUNX1T1Q06455 604 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 DAG1Q14118 895 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 RAB39AQ14964 217 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 CARTPTQ16568 116 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 C3orf36Q3SXR2 165 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SAMD4BQ5PRF9 694 aaKnown RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 GKAP1Q5VSY0 366 aaPredicted RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 TMEM53Q6P2H8 277 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 C16orf89Q6UX73 402 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 NHLRC1Q6VVB1 395 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SLC16A14Q7RTX9 510 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 PIWIL3Q7Z3Z3 882 aaKnown RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 PIGWQ7Z7B1 504 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 OAFQ86UD1 273 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 DEFB107AQ8IZN7 70 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 PGAM4Q8N0Y7 254 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SLC22A24Q8N4F4 322 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 FAM169BQ8N8A8 192 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MAPK1IP1LQ8NDC0 245 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 OR4K5Q8NGD3 323 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 OR13C2Q8NGS9 318 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 ACOT11Q8WXI4 607 aaPredicted RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 MS4A3Q96HJ5 214 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 CDRT15Q96T59 188 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SH3GL3Q99963 347 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 RHNO1Q9BSD3 238 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 GRIP2Q9C0E4 1043 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 NDEL1Q9GZM8 345 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 TXNIPQ9H3M7 391 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 DYNLRB1Q9NP97 96 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MAN2C1Q9NTJ4 1040 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 TMEM38BQ9NVV0 291 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 NDE1Q9NXR1 346 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MAGEL2Q9UJ55 1249 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 FBXL3Q9UKT7 428 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SPEF1Q9Y4P9 236 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 FKBP7Q9Y680 259 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 ENPP4Q9Y6X5 453 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MTORP42345 2549 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 A0A087WUU8 490 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 HTR3EA5X5Y0 456 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 B9A039 149 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 H7C417 338 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 ARPC2O15144 300 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 PDE5AO76074 875 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 LY6HO94772 140 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 DIRAS1O95057 198 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 TP53P04637 393 aaPredicted RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 HEXAP06865 529 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 NPR2P20594 1047 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 THBS4P35443 961 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 MNAT1P51948 309 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 RPL27P61353 136 aaKnown RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 SPIBQ01892 262 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 HGFACQ04756 655 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 PRKCDQ05655 676 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 FMODQ06828 376 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 TAF11Q15544 211 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 ADIPOQQ15848 244 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 SGCAQ16586 387 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 SLC36A2Q495M3 483 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 LRFN4Q6PJG9 635 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 TBPL2Q6SJ96 375 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 MBOAT2Q6ZWT7 520 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 SKA3Q8IX90 412 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 RNF113BQ8IZP6 322 aaKnown RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 SVOPLQ8N434 492 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 LRRC18Q8N456 261 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 ZNF525Q8N782 197 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 FAM86B1Q8N7N1 296 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 IL17RDQ8NFM7 739 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 OR52J3Q8NH60 311 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 LIPHQ8WWY8 451 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 NSMAFQ92636 917 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 HDAC2Q92769 488 aaKnown RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 MCHR2Q969V1 340 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 MCUR1Q96AQ8 359 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 FAM46AQ96IP4 442 aaKnown RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 NSMCE2Q96MF7 247 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 RBP7Q96R05 134 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 TNFRSF13CQ96RJ3 184 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 CCT8L2Q96SF2 557 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 REG4Q9BYZ8 158 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 KCNN2Q9H2S1 579 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 NMNAT1Q9HAN9 279 aaPredicted RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 CDH20Q9HBT6 801 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 CCNB1IP1Q9NPC3 277 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 KRCC1Q9NPI7 259 aaPredicted RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 DCAF13Q9NV06 445 aaKnown RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 B3GNT2Q9NY97 397 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 AURKCQ9UQB9 309 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 TMEM5Q9Y2B1 443 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms