RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 OR2T29Q8NH02 315 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 MAGEE2Q8TD90 523 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 NSMAFQ92636 917 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 MCHR2Q969V1 340 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 RADILQ96JH8 1075 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 CCL19Q99731 98 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 CHID1Q9BWS9 393 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 MRPL13Q9BYD1 178 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 LRMDAQ9H2I8 198 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 OBP2BQ9NPH6 170 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 TACC2O95359 2948 aa13.84□□□□□ -0.19
RABGGTA-206ENST00000558649 LRBAP50851 2863 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 A6NIZ1 184 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 GNGT2O14610 69 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 ARHGEF9O43307 516 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 CST1P01037 141 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 HLA-HP01893 362 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 CD14P08571 375 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 FPR3P25089 353 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 ZNF84P51523 738 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 FXYD6P3P58550 94 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 RAP1BP61224 184 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 RAP1AP62834 184 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 PIGFQ07326 219 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 HIST3H3Q16695 136 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 FAM205BPQ63HN1 556 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 PGBD2Q6P3X8 592 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 MDP1Q86V88 176 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 OR4C15Q8NGM1 316 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 ZNF519Q8TB69 540 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 GNPDA2Q8TDQ7 276 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 FBXW5Q969U6 566 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 RASD2Q96D21 266 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 BOD1Q96IK1 185 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 Q96M85 177 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 SLC38A2Q96QD8 506 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 KCNK17Q96T54 332 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.2
RABGGTA-206ENST00000558649 POLQO75417 2590 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 TEX15Q9BXT5 2789 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 IGHV1-18A0A0C4DH31 117 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 TEX13CA0A0J9YWL9 993 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 ATP6V1G2-DDX39BF2Z307 99 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 XKRYO14609 159 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 PTP4A3O75365 173 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 PPP1R3DO95685 299 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 CELA3BP08861 270 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 IDH3GP51553 393 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 ART1P52961 327 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 KRR1Q13601 381 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 MESTQ5EB52 335 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 C1orf146Q5VVC0 180 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 DEPDC4Q8N2C3 294 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 SLC22A24Q8N4F4 322 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 ARIH2OSQ8N7S6 290 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 NANOS1Q8WY41 292 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 NINJ1Q92982 152 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 SH3GL3Q99963 347 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 KCNS3Q9BQ31 491 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 OR52D1Q9H346 318 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 SEC61A2Q9H9S3 476 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 NOX3Q9HBY0 568 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 TMEM38BQ9NVV0 291 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 MOKQ9UQ07 419 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 IER3IP1Q9Y5U9 82 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 CSMD1Q96PZ7 3565 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 NOTCH2Q04721 2471 aa13.82□□□□□ -0.2
RABGGTA-206ENST00000558649 IGKV1D-43A0A0B4J1Z2 117 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 A0A1W2PPL8 197 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 SOCS2O14508 198 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 FKBP6O75344 327 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 CECR9P0C854 216 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 PATE4P0C8F1 98 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 OR8G3PP0DMU2 310 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 NR2C1P13056 603 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 HOXB1P14653 301 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 CD53P19397 219 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 CDAP32320 146 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 GSSP48637 474 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 PTDSS1P48651 473 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 HMGA2P52926 109 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 TSPAN31Q12999 210 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 C1orf94Q6P1W5 598 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 C20orf204Q6ZNR8 217 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 ZNF627Q7L945 461 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 MYPOPQ86VE0 399 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 SKA3Q8IX90 412 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 CCDC36Q8IYA8 594 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 LRRC18Q8N456 261 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 AQP11Q8NBQ7 271 aa13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 GTPBP3Q969Y2 492 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-206ENST00000558649 SAMD8Q96LT4 415 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms