RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 COX6B1P14854 86 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 PEX19P40855 299 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 KIR2DL3P43628 341 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 FMODQ06828 376 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 STK11Q15831 433 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 GABRA6Q16445 453 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 C22orf34Q6ZV56 151 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 TEX47Q8TBZ9 253 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 MCHR2Q969V1 340 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 ZC3HAV1LQ96H79 300 aaKnown RBP15.33■□□□□ 0.04
TPM1-214ENST00000558544 WFIKKN1Q96NZ8 548 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 SPOCK3Q9BQ16 436 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 MED18Q9BUE0 208 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 ALG12Q9BV10 488 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 SMURF2Q9HAU4 748 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 PAPOLBQ9NRJ5 636 aaKnown RBP15.33■□□□□ 0.04
TPM1-214ENST00000558544 CRIM1Q9NZV1 1036 aa15.33■□□□□ 0.04
TPM1-214ENST00000558544 NKX1-2Q9UD57 310 aaPredicted RBP15.33■□□□□ 0.04
TPM1-214ENST00000558544 BHLHE40O14503 412 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 SLC2A10O95528 541 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 TXNDC12O95881 172 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 OSMP13725 252 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 APEHP13798 732 aaKnown RBP15.32■□□□□ 0.04
TPM1-214ENST00000558544 POU1F1P28069 291 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 NOS3P29474 1203 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 ARF1P84077 181 aaKnown RBP15.32■□□□□ 0.04
TPM1-214ENST00000558544 TGFBR3Q03167 851 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 HIST3H3Q16695 136 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 LRFN4Q6PJG9 635 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 OR1K1Q8NGR3 316 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 OR4Q3Q8NH05 313 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 DNAJC9Q8WXX5 260 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 OR10A4Q9H209 315 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 NDRG3Q9UGV2 375 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 POFUT2Q9Y2G5 429 aa15.32■□□□□ 0.04
TPM1-214ENST00000558544 IGKV1D-43A0A0B4J1Z2 117 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 ZNF99A8MXY4 864 aaPredicted RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 IMPA2O14732 288 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 ARPC3O15145 178 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 HIST1H1CP16403 213 aaKnown RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 SH3BGRP55822 239 aaPredicted RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 RCN1Q15293 331 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 HIKESHIQ53FT3 197 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 SLC35F1Q5T1Q4 408 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 OR7E24Q6IFN5 339 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 PTCHD4Q6ZW05 846 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 IQCF1Q8N6M8 205 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 C1orf162Q8NEQ5 155 aaPredicted RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
TPM1-214ENST00000558544 CIB1Q99828 191 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 NELFAQ9H3P2 528 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 RNPEPL1Q9HAU8 725 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 DCHS2Q6V1P9 2916 aa15.31■□□□□ 0.04
TPM1-214ENST00000558544 A0A096LPE4 126 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 A0A1W2PPZ6 126 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 A0A1W2PR80 420 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 SLC22A23A1A5C7 686 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 PRSS37A4D1T9 235 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 OR5H1A6NKK0 313 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 DHHO43323 396 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 THBDP07204 575 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 NR2C1P13056 603 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 PPP3CBP16298 524 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 CDKN2AP42771 156 aaKnown RBP15.3■□□□□ 0.04
TPM1-214ENST00000558544 TAB1Q15750 504 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 TBRG1Q3YBR2 411 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 KDM4DQ6B0I6 523 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 ALKBH2Q6NS38 261 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 LEG1Q6P5S2 330 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 ADCK1Q86TW2 530 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 JAZF1Q86VZ6 243 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 SDR9C7Q8NEX9 313 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 OR4K13Q8NH42 304 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 OR52N5Q8NH56 324 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 NSMAFQ92636 917 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 MUS81Q96NY9 551 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 RBP7Q96R05 134 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 FOXB1Q99853 325 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 SYT4Q9H2B2 425 aa15.3■□□□□ 0.04
TPM1-214ENST00000558544 IDH3BO43837 385 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 ANPEPP15144 967 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 B4GALT1P15291 398 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 IGFBP5P24593 272 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 HOXC12P31275 282 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 ZNF84P51523 738 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 ZNF133P52736 654 aaPredicted RBP15.29■□□□□ 0.04
TPM1-214ENST00000558544 PPP2R2BQ00005 443 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.29■□□□□ 0.04
TPM1-214ENST00000558544 SNCBQ16143 134 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 PGGHGQ32M88 737 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 TIMM23BQ5SRD1 257 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 THEM4Q5T1C6 240 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 C10orf128Q5T292 105 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 ZNF787Q6DD87 383 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 ANKRD16Q6P6B7 361 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 SLC25A47Q6Q0C1 308 aa15.29■□□□□ 0.04
TPM1-214ENST00000558544 KLHL24Q6TFL4 600 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms