RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 B4GALT1P15291 398 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 HOXB6P17509 224 aaKnown RBP10.8□□□□□ -0.68
SMAD3-205ENST00000558428 FPR3P25089 353 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 PTAFRP25105 342 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 CAPZA2P47755 286 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 HIST3H3Q16695 136 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 C1orf146Q5VVC0 180 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 PGBD2Q6P3X8 592 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 LRFN4Q6PJG9 635 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 SMARCD3Q6STE5 483 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF519Q8TB69 540 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 TMEM204Q9BSN7 226 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 ALG12Q9BV10 488 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 YY1AP1Q9H869 796 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 VNN3Q9NY84 501 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 GRHPRQ9UBQ7 328 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 IL20RAQ9UHF4 553 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 ST6GALNAC2Q9UJ37 374 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 EDARQ9UNE0 448 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 PLEKHA6Q9Y2H5 1048 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 ADAM18Q9Y3Q7 739 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-205ENST00000558428 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 A6NIZ1 184 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 XKRYO14609 159 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ABCD4O14678 606 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 FKBP6O75344 327 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 CIB2O75838 187 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 NR2C1P13056 603 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 PAX7P23759 505 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 CD40P25942 277 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 GSSP48637 474 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF84P51523 738 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 FXYD6P3P58550 94 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 RAP1BP61224 184 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 RAP1AP62834 184 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 TSPAN31Q12999 210 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ADAM5Q6NVV9 412 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 PAMR1Q6UXH9 720 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ASRGL1Q7L266 308 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF627Q7L945 461 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 FAM122BQ7Z309 247 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 CCDC36Q8IYA8 594 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ARIH2OSQ8N7S6 290 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 KBTBD8Q8NFY9 601 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 AKAP1Q92667 903 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMAD3-205ENST00000558428 Q96M85 177 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF570Q96NI8 536 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 RBP7Q96R05 134 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 GPX7Q96SL4 187 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-205ENST00000558428 OR52D1Q9H346 318 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 CCM2LQ9NUG4 571 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-205ENST00000558428 MGAT4BQ9UQ53 548 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 ARID1AO14497 2285 aa10.79□□□□□ -0.68
SMAD3-205ENST00000558428 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF503-AS2A6NEH8 195 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 H7C1C5 153 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 ARHGEF9O43307 516 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SLC2A10O95528 541 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 GASTP01350 101 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 CD79AP11912 226 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 DNASE1P24855 282 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SDHAP31040 664 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 RPS6KA3P51812 740 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 IST1P53990 364 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 LCN6P62502 163 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 FMODQ06828 376 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SPOCK1Q08629 439 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 KRR1Q13601 381 aaKnown RBP10.78□□□□□ -0.68
SMAD3-205ENST00000558428 KEAP1Q14145 624 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 GK3PQ14409 553 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 MICAQ29983 383 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 MESTQ5EB52 335 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 C10orf128Q5T292 105 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 GPR139Q6DWJ6 353 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF770Q6IQ21 691 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SLC22A25Q6T423 547 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 DPY19L2P2Q6ZN68 376 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 CLDN22Q8N7P3 220 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 AQP11Q8NBQ7 271 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 OR10G2Q8NGC3 310 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 FNDC8Q8TC99 324 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
SMAD3-205ENST00000558428 NSMAFQ92636 917 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 NEUROG1Q92886 237 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SLCO4A1Q96BD0 722 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 RASD2Q96D21 266 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 SLC38A2Q96QD8 506 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 MOV10Q9HCE1 1003 aaKnown RBP10.78□□□□□ -0.68
SMAD3-205ENST00000558428 NRIP3Q9NQ35 241 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 TMEM38BQ9NVV0 291 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 IER3IP1Q9Y5U9 82 aa10.78□□□□□ -0.68
SMAD3-205ENST00000558428 RTTNQ86VV8 2226 aa10.77□□□□□ -0.68
SMAD3-205ENST00000558428 IGKV1D-43A0A0B4J1Z2 117 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SHISA9B4DS77 424 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms