RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM102Q8N9M5 508 aaPredicted RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 ZNRF4Q8WWF5 429 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 DTD2Q96FN9 168 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 A0A0A6YYJ9 748 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 LPLP06858 475 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 HCCSP53701 268 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 UBE2G2P60604 165 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 MISPQ8IVT2 679 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 ZFP62Q8NB50 900 aaPredicted RBP12.89□□□□□ -0.35
SPG11-210ENST00000558319 PPP1R35Q8TAP8 253 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 NIPSNAP1Q9BPW8 284 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 SEMA4CQ9C0C4 833 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 H0Y8X5 98 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 AIFM1O95831 613 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 MT-ND4LP03901 98 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 ARL16Q0P5N6 197 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 BAK1Q16611 211 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 LRRTM1Q86UE6 522 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 GCNT2Q8N0V5 402 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 MMP21Q8N119 569 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
SPG11-210ENST00000558319 MEX3AA1L020 520 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 GSTP1P09211 210 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 ITGB7P26010 798 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 TGFBR1P36897 503 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZNF718Q3SXZ3 478 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 OR51A2Q8NGJ7 313 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 GLSO94925 669 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 GLI4P10075 376 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 RPS19P39019 145 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 SIGLECL1Q8N7X8 197 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 TNFRSF13CQ96RJ3 184 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZNF331Q9NQX6 463 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 PHOX2AO14813 284 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 PRAMEF4O60810 478 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 TCN2P20062 427 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 DUSP2Q05923 314 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 SERTAD2Q14140 314 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 SPRED1Q7Z699 444 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 SEMA6DQ8NFY4 1073 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 WSB2Q9NYS7 404 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 GNG12Q9UBI6 72 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 CROCCQ5TZA2 2017 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 EPHA5P54756 1037 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZNF266Q14584 549 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 PLSCR3Q9NRY6 295 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 UBL3O95164 117 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 SBK2P0C263 348 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 SPI1P17947 270 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 ACKR3P25106 362 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 INHBCP55103 352 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 KRTDAPP60985 99 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
SPG11-210ENST00000558319 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 AK3Q9UIJ7 227 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 A8MVM7 634 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 NAT1P18440 290 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 PAX6P26367 422 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 VRK3Q8IV63 474 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 FGGYQ96C11 551 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
SPG11-210ENST00000558319 TRIM77I1YAP6 450 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 RBPJQ06330 500 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 DEFB108BQ8NET1 73 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms