RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NUAK2Q9H093 628 aa14.97□□□□□ -0.01
SNX1-203ENST00000558040 RACGAP1Q9H0H5 632 aa14.97□□□□□ -0.01
SNX1-203ENST00000558040 TP63Q9H3D4 680 aaPredicted RBP14.97□□□□□ -0.01
SNX1-203ENST00000558040 RERGLQ9H628 205 aa14.97□□□□□ -0.01
SNX1-203ENST00000558040 SRA1Q9HD15 236 aaKnown RBP14.97□□□□□ -0.01
SNX1-203ENST00000558040 B3GAT2Q9NPZ5 323 aa14.97□□□□□ -0.01
SNX1-203ENST00000558040 CCDC182A6NF36 153 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 PTGES3LE9PB15 166 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 MRPS14O60783 128 aaKnown RBP14.96□□□□□ -0.01
SNX1-203ENST00000558040 KHDRBS3O75525 346 aaKnown RBP14.96□□□□□ -0.01
SNX1-203ENST00000558040 ATP6V1E1P36543 226 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 SLC15A1P46059 708 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 SELENOPP49908 381 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 SLC35A2P78381 396 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 RAB40BQ12829 278 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 RPTNQ6XPR3 784 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 OR6V1Q8N148 313 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 STX19Q8N4C7 294 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 CPT1CQ8TCG5 803 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 GGHQ92820 318 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 TMEM54Q969K7 222 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 ZNF775Q96BV0 537 aaPredicted RBP14.96□□□□□ -0.01
SNX1-203ENST00000558040 TSSK2Q96PF2 358 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 COPS4Q9BT78 406 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 DUSP21Q9H596 190 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 MRPS18AQ9NVS2 196 aaKnown RBP14.96□□□□□ -0.01
SNX1-203ENST00000558040 HAO2Q9NYQ3 351 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 GLTPQ9NZD2 209 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 CLEC4AQ9UMR7 237 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 B9D1Q9UPM9 204 aa14.96□□□□□ -0.01
SNX1-203ENST00000558040 MBD3L4A6NDZ8 208 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 MBD3L3A6NE82 208 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 TRIM64A6NGJ6 449 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 MBD3L5A6NJ08 208 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 RGS10O43665 173 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 SLC19A2O60779 497 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 SS18L1O75177 396 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 CTLA4P16410 223 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 AGTR1P30556 359 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 GSTT1P30711 240 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 PYCR1P32322 319 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 GLO1Q04760 184 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 NFATC3Q12968 1075 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 GGTLC2Q14390 218 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 HIST3H3Q16695 136 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 EIF2S3LQ2VIR3 472 aaKnown RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 WDFY1Q8IWB7 410 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 C20orf196Q8IYI0 205 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 GPR137CQ8N3F9 429 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 POMGNT2Q8NAT1 580 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 TSPAN14Q8NG11 270 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 MBD3L2Q8NHZ7 208 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 KISS1RQ969F8 398 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 FKBP14Q9NWM8 211 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 FOXD3Q9UJU5 478 aaPredicted RBP14.95□□□□□ -0.02
SNX1-203ENST00000558040 ZNF835Q9Y2P0 537 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 EMC9Q9Y3B6 208 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 PCDHGB1Q9Y5G3 927 aa14.95□□□□□ -0.02
SNX1-203ENST00000558040 A0A087WXM4 84 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 IGLV1-36A0A0B4J1U3 117 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 DCTN6O00399 190 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 FADS2O95864 444 aaKnown RBP14.94□□□□□ -0.02
SNX1-203ENST00000558040 QDPRP09417 244 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 PER3P56645 1201 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 FMODQ06828 376 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 ST3GAL4Q11206 333 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 B3GNT6Q6ZMB0 384 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 ZNF100Q8IYN0 542 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 C9orf106Q8NAJ2 232 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 ST6GALNAC3Q8NDV1 305 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 OR51L1Q8NGJ5 315 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 MCHR2Q969V1 340 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 APH1AQ96BI3 265 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 NMD3Q96D46 503 aaKnown RBP14.94□□□□□ -0.02
SNX1-203ENST00000558040 LGALS12Q96DT0 336 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 ZMYND19Q96E35 227 aaPredicted RBP14.94□□□□□ -0.02
SNX1-203ENST00000558040 ZFP3Q96NJ6 502 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 CNN2Q99439 309 aaKnown RBP14.94□□□□□ -0.02
SNX1-203ENST00000558040 ULBP2Q9BZM5 246 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 LINC00470Q9BZP3 86 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 SLCO5A1Q9H2Y9 848 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 PAK1IP1Q9NWT1 392 aaPredicted RBP14.94□□□□□ -0.02
SNX1-203ENST00000558040 SNX5Q9Y5X3 404 aa14.94□□□□□ -0.02
SNX1-203ENST00000558040 ACACBO00763 2458 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 ATXN7O15265 892 aaPredicted RBP14.93□□□□□ -0.02
SNX1-203ENST00000558040 KRT33AO76009 404 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 RAB36O95755 333 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 HLA-DQA2P01906 255 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 CDK1P06493 297 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 CRHP06850 196 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 ZNF84P51523 738 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 ZNF133P52736 654 aaPredicted RBP14.93□□□□□ -0.02
SNX1-203ENST00000558040 CASP6P55212 293 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 C10orf128Q5T292 105 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 RIPPLY2Q5TAB7 128 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 LINC01590Q5TEZ4 76 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 ZNF773Q6PK81 442 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 SLC25A47Q6Q0C1 308 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 FAM214BQ7L5A3 538 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 PRSS48Q7RTY5 328 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms