RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 WACQ9BTA9 647 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 EMC6Q9BV81 110 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 GABARAPL3Q9BY60 117 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 VCXQ9H320 206 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 EGLN3Q9H6Z9 239 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 RNPEPL1Q9HAU8 725 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 GPR35Q9HC97 309 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 VSX1Q9NZR4 365 aaPredicted RBP12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 NDRG3Q9UGV2 375 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 IER3IP1Q9Y5U9 82 aa12.44□□□□□ -0.42
SUPT16H-208ENST00000557652 NKX2-6A6NCS4 301 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 ZNF99A8MXY4 864 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 UPK3AO75631 287 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 PPP1R3DO95685 299 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 RENP00797 406 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 IGFBP2P18065 325 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 IGHV1-2P23083 117 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 IL32P24001 234 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 GUCA1AP43080 201 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 CDK5Q00535 292 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 MYBPC1Q00872 1141 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 ROR2Q01974 943 aaKnown RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 CD47Q08722 323 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 TOP3AQ13472 1001 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 MELKQ14680 651 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 PGGHGQ32M88 737 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 NMD3Q96D46 503 aaKnown RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 Q96M85 177 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 MUS81Q96NY9 551 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 CMC2Q9NRP2 79 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 TMEFF2Q9UIK5 374 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 TENM4Q6N022 2769 aa12.43□□□□□ -0.42
SUPT16H-208ENST00000557652 ABCA4P78363 2273 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 TEX13CA0A0J9YWL9 993 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 SLC22A23A1A5C7 686 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 RIIAD1A6NNX1 92 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 EI24O14681 340 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 ARHGEF9O43307 516 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 DHHO43323 396 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 SOX14O95416 240 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 ITGA5P08648 1049 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 ZNF3P17036 446 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 NPR2P20594 1047 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 HOXC12P31275 282 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 BLVRAP53004 296 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 SLC34A1Q06495 639 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 NPRL3Q12980 569 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 CDSNQ15517 529 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 MESTQ5EB52 335 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 IGFN1Q86VF2 1251 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 CBR4Q8N4T8 237 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 OR8D4Q8NGM9 314 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 HDAC2Q92769 488 aaKnown RBP12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 MCHR2Q969V1 340 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 DACH2Q96NX9 599 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 PSMG3-AS1Q96PY0 264 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 SLC38A2Q96QD8 506 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 RACGAP1Q9H0H5 632 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 NGBQ9NPG2 151 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 FKBP7Q9Y680 259 aa12.42□□□□□ -0.42
SUPT16H-208ENST00000557652 PRSS44E7EML9 344 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FARS2O95363 451 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 QDPRP09417 244 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 PAICSP22234 425 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 EDNRAP25101 427 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 MRPS34P82930 218 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 GINS1Q14691 196 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 TRIP10Q15642 601 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 GABRA6Q16445 453 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 CLEC12AQ5QGZ9 265 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 CARD17Q5XLA6 110 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 LRFN4Q6PJG9 635 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 SLC25A47Q6Q0C1 308 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 KLHL24Q6TFL4 600 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 DMRTC2Q8IXT2 367 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FOXB1Q99853 325 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FN3KQ9H479 309 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 ZNF226Q9NYT6 803 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms