RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 F10P00742 488 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 OPN1MWP04001 364 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 THY1P04216 161 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CD55P08174 381 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TFPTP0C1Z6 253 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 OPN1MW2P0DN77 364 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 OPN1MW3P0DN78 364 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CPN1P15169 458 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 IGHV1-2P23083 117 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 FASP25445 335 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ATP5A1P25705 553 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PSMA2P25787 234 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PSMA5P28066 241 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ADSSP30520 456 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 HTR2BP41595 481 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 OR1G1P47890 313 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 STARP49675 285 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 SLC26A2P50443 739 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 STX17P56962 302 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RND3P61587 244 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TSPAN5P62079 268 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 UBE2IP63279 158 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 EWSR1Q01844 656 aaKnown RBP eCLIP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 BDH1Q02338 343 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 C2orf54Q08AI8 447 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 SERTAD2Q14140 314 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TGIF1Q15583 401 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 SLC1A5Q15758 541 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 SGCAQ16586 387 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PDK4Q16654 411 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 HADHQ16836 314 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CCDC58Q4VC31 144 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 LIN52Q52LA3 116 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TEX44Q53QW1 395 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CLLU1OSQ5K130 101 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RABGAP1LQ5R372 815 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 MARCH8Q5T0T0 291 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PYHIN1Q6K0P9 492 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 NIPAL1Q6NVV3 410 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ERICH5Q6P6B1 374 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 BLOC1S2Q6QNY1 142 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CLEC2AQ6UVW9 174 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PEX26Q7Z412 305 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CDR2LQ86X02 465 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ECHDC2Q86YB7 292 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 C9orf40Q8IXQ3 194 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 FBXL16Q8N461 479 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TBC1D19Q8N5T2 526 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CSNK1A1LQ8N752 337 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PNPT1Q8TCS8 783 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PYROXD1Q8WU10 500 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 NAT14Q8WUY8 206 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 NELFBQ8WX92 580 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RPL3LQ92901 407 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RAD51AP1Q96B01 352 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TUBGCP3Q96CW5 907 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CHMP6Q96FZ7 201 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 GCOM2Q9BZD3 368 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ELOVL4Q9GZR5 314 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 CWH43Q9H720 699 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RMND5AQ9H871 391 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 TM9SF3Q9HD45 589 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 RPRD1BQ9NQG5 326 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 DIABLOQ9NR28 239 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 PNO1Q9NRX1 252 aaKnown RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 ZNF107Q9UII5 783 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-212ENST00000557477 STK38LQ9Y2H1 464 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 GSTK1Q9Y2Q3 226 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 NAALAD2Q9Y3Q0 740 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 SPACA6W5XKT8 324 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 COL1A2P08123 1366 aa3.48□□□□□ -1.85
PRPF39-212ENST00000557477 FRMPD4Q14CM0 1322 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 LAMA4Q16363 1823 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 FUOMA2VDF0 154 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TRPC5OSA6NMA1 111 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ATP6V1G2-DDX39BF2Z307 99 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 CDX4O14627 284 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-212ENST00000557477 SLC22A1O15245 554 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 CCL16O15467 120 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TRAPPC3O43617 180 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TBX19O60806 448 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 IL6P05231 212 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 HBQ1P09105 142 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 GIG44P09565 113 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ANXA8P13928 327 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TPSB2P20231 275 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 NT5EP21589 574 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 UQCRC2P22695 453 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 MDH2P40926 338 aaKnown RBP3.47□□□□□ -1.85
PRPF39-212ENST00000557477 XCR1P46094 333 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 RGS4P49798 205 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 SLC25A1P53007 311 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 PSMC5P62195 406 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 UBE2HP62256 183 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 RAD51Q06609 339 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ST3GAL3Q11203 375 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TPSAB1Q15661 275 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 AANATQ16613 207 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 RGS21Q2M5E4 152 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 GLYR1Q49A26 553 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms