RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CARTPTQ16568 116 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 GPAT3Q53EU6 434 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 TMEM225Q6GV28 225 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 ANKRD46Q86W74 232 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 RNF130Q86XS8 419 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 CCDC36Q8IYA8 594 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF440Q8IYI8 595 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 LRRC34Q8IZ02 419 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 UBLCP1Q8WVY7 318 aaPredicted RBP7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 RHOXF2Q9BQY4 288 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 DPY30Q9C005 99 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 RLIMQ9NVW2 624 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 B3GNT2Q9NY97 397 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 BTNL2Q9UIR0 455 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 RASD1Q9Y272 281 aa7.69□□□□□ -1.18
GTF2A1-204ENST00000556268 DYSFO75923 2080 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 LOC102725191A0A1B0GVB3 256 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SMIM23A6NLE4 172 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 B4DSR2 109 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 FTCDNL1E5RQL4 147 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 hCG_2039718K7EN88 272 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 ITM2AO43736 263 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SKAP2O75563 359 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SNUPNO95149 360 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 CD1AP06126 327 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 DBIP07108 87 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 IL7RP16871 459 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SRP14P37108 136 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SH3BGRP55822 239 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 GNA13Q14344 377 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 TRIP10Q15642 601 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SPANXN4Q5MJ08 99 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 MRPL2Q5T653 305 aaKnown RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 WBP2NLQ6ICG8 309 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 NHLRC1Q6VVB1 395 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 C12orf54Q6X4T0 127 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 MFSD8Q8NHS3 518 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 WDR60Q8WVS4 1066 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF75AQ96N20 296 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 ANKRD27Q96NW4 1050 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 KCNS3Q9BQ31 491 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 SLC35A5Q9BS91 424 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 C20orf27Q9GZN8 174 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 MARCOQ9UEW3 520 aaPredicted RBP7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 LGALS13Q9UHV8 139 aa7.68□□□□□ -1.18
GTF2A1-204ENST00000556268 A0A096LPI6 279 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 IGHV2OR16-5A0A0B4J2B6 119 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TMEM89A2RUT3 159 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 LYNX1G3V0Z9 82 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SPRY1O43609 319 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TYROBPO43914 113 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SPAG7O75391 227 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 KRT33AO76009 404 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 NUDT3O95989 172 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ADRA2AP08913 450 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 GKN3PP0CG01 181 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 LYNX1P0DP58 116 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 CREB1P16220 341 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 PCMT1P22061 227 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 COL8A2P25067 703 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 CHI3L1P36222 383 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ARR3P36575 388 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 MVDP53602 400 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TMEM33P57088 247 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TUBA1BP68363 451 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TUBA4AP68366 448 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ARF1P84077 181 aaKnown RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ROR2Q01974 943 aaKnown RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 EGR4Q05215 589 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 BNIP2Q12982 314 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 FAM174BQ3ZCQ3 159 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 C1orf140Q5VVS0 124 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 USP43Q70EL4 1123 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TUBA1AQ71U36 451 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 GPAT4Q86UL3 456 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 MYPOPQ86VE0 399 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 CLIP4Q8N3C7 705 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SVOPLQ8N434 492 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 RIBC1Q8N443 379 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SEMA6DQ8NFY4 1073 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 KIF18AQ8NI77 898 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 CLPTM1LQ96KA5 538 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 TEX37Q96LM6 180 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 OXGR1Q96P68 337 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SNX18Q96RF0 628 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 PTDSS2Q9BVG9 487 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ROPN1BQ9BZX4 212 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 ROPN1Q9HAT0 212 aaPredicted RBP7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 B3GAT1Q9P2W7 334 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 HAO1Q9UJM8 370 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SPEF1Q9Y4P9 236 aa7.67□□□□□ -1.18
GTF2A1-204ENST00000556268 SYNGR3O43761 229 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ERCC1P07992 297 aaPredicted RBP7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 MYZAPP0CAP1 466 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 NR2F1P10589 423 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 ZNF35P13682 527 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 PRG2P13727 222 aa7.66□□□□□ -1.18
GTF2A1-204ENST00000556268 UQCRBP14927 111 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms