RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CDC42EP4Q9H3Q1 356 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PLK3Q9H4B4 646 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 UBQLN4Q9NRR5 601 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 DDX18Q9NVP1 670 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 HIF1ANQ9NWT6 349 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 TAS2R16Q9NYV7 291 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 TAS2R7Q9NYW3 318 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 EMC3Q9P0I2 261 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 VPS29Q9UBQ0 182 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 GRID1Q9ULK0 1009 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 SNX6Q9UNH7 406 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 CARD8Q9Y2G2 431 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 WBP11Q9Y2W2 641 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ADAM18Q9Y3Q7 739 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 IGKV3D-15A0A087WSY6 115 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 IGHV3-15A0A0B4J1V0 119 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 GNG14A0A1W2PPG7 69 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 A0A1W2PQD3 144 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FAM159BA6NKW6 160 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 ATP6V1G2-DDX39BF2Z307 99 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 GPR171O14626 319 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PAGE4O60829 102 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 MRPL33O75394 65 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PDE5AO76074 875 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 NKX2-2O95096 273 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 HSPA4LO95757 839 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 BCL10O95999 233 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 IGHV3-9P01782 118 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 C2P06681 752 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 IFI6P09912 130 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 OR4A8P0C604 315 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 MYZAPP0CAP1 466 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PRPS2P11908 318 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PAX7P23759 505 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 SSTR1P30872 391 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PPOXP50336 477 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CLNS1AP54105 237 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PRPS1P60891 318 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TGFBR3Q03167 851 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FOXF1Q12946 379 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TRAF3Q13114 568 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TRADDQ15628 312 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FAHD2BQ6P2I3 314 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 KLC3Q6P597 504 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TMEM107Q6UX40 140 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TMPPEQ6ZT21 453 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 C3orf62Q6ZUJ4 267 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 SPATA19Q7Z5L4 167 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CMC1Q7Z7K0 106 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CTAGE3PQ8IX95 158 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 SLC35F6Q8N357 371 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 GATSQ8NAP1 163 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 OR4F6Q8NGB9 312 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 C16orf78Q8WTQ4 265 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PIK3R3Q92569 461 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 RNF183Q96D59 192 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FAHD2AQ96GK7 314 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 RSRC1Q96IZ7 334 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF300Q96RE9 604 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 DOK1Q99704 481 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 HOXD1Q9GZZ0 328 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 GLIPR2Q9H4G4 154 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 COQ10BQ9H8M1 238 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 NTN4Q9HB63 628 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 SLC17A5Q9NRA2 495 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CA10Q9NS85 328 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FARSBQ9NSD9 589 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 DDX28Q9NUL7 540 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 MED29Q9NX70 200 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CPSF2Q9P2I0 782 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 HAO1Q9UJM8 370 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TMCO1Q9UM00 188 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 NOSIPQ9Y314 301 aaKnown RBP4.17□□□□□ -1.74
ATXN3-228ENST00000554592 FAM96BQ9Y3D0 163 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 LYVE1Q9Y5Y7 322 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 PRR14LQ5THK1 2151 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 CADP27708 2225 aa4.17□□□□□ -1.74
ATXN3-228ENST00000554592 TCRBV9S1A1TA0A576 114 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 USP17L23D6RBM5 183 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 H3BNH8 94 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 PDLIM1O00151 329 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 GTPBP1O00178 669 aaKnown RBP4.16□□□□□ -1.74
ATXN3-228ENST00000554592 MANBAO00462 879 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 AP3D1O14617 1153 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 PCDH7O60245 1069 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 SMIM24O75264 130 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 KCNK2O95069 426 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 KLHL2O95198 593 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 NUDT14O95848 222 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 OTCP00480 354 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 CRYAAP02489 173 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 KRT6AP02538 564 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 KRT6BP04259 564 aa4.16□□□□□ -1.74
ATXN3-228ENST00000554592 MSMBP08118 114 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms