RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ZNF835Q9Y2P0 537 aa8.66□□□□□ -1.02
CHD8-204ENST00000553622 PCDHGB5Q9Y5G0 923 aa8.66□□□□□ -1.02
CHD8-204ENST00000553622 A0A1W2PPL8 197 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 MBD3L4A6NDZ8 208 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 MBD3L3A6NE82 208 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 MBD3L5A6NJ08 208 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 SNTNA6NMZ2 147 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 CCL21O00585 134 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 SS18L1O75177 396 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 WBP4O75554 376 aaKnown RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 QDPRP09417 244 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 NR2C1P13056 603 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 NTF4P34130 210 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 ATP6V1E1P36543 226 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 TLE1Q04724 770 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 FOXF2Q12947 444 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 IGFBP7Q16270 282 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 PHYHD1Q5SRE7 291 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 ZNF362Q5T0B9 420 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 MEDAGQ5VYS4 303 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 DNM1P34Q6PK57 102 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 NHLRC1Q6VVB1 395 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 B3GLCTQ6Y288 498 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 SEM1Q6ZVN7 128 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 GID4Q8IVV7 300 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 TMEM123Q8N131 208 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 MARVELD2Q8N4S9 558 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 FAM26EQ8N5C1 309 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 OR2T4Q8NH00 348 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 MBD3L2Q8NHZ7 208 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 PRR7Q8TB68 274 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 APH1BQ8WW43 257 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 RFKQ969G6 155 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 ALKBH3Q96Q83 286 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 KCNK17Q96T54 332 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 RBM24Q9BX46 236 aaKnown RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 NUAK2Q9H093 628 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 SLCO5A1Q9H2Y9 848 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 GP6Q9HCN6 339 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 AMBNQ9NP70 447 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 GLTPQ9NZD2 209 aa8.65□□□□□ -1.02
CHD8-204ENST00000553622 VSX1Q9NZR4 365 aaPredicted RBP8.65□□□□□ -1.02
CHD8-204ENST00000553622 POLEQ07864 2286 aa8.65□□□□□ -1.03
CHD8-204ENST00000553622 ZFYVE26Q68DK2 2539 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ZNF587BE7ETH6 402 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 DCTN6O00399 190 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 PRODHO43272 600 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 KHDRBS3O75525 346 aaKnown RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 UPK3AO75631 287 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ZNF432O94892 652 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 APOL3O95236 402 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 GPANK1O95872 356 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 STSP08842 583 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 MRPL3P09001 348 aaKnown RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 CTLA4P16410 223 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 SPI1P17947 270 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 GABRB1P18505 474 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 EDNRAP25101 427 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 CRABP1P29762 137 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 TIMP3P35625 211 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 CA7P43166 264 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ZNF84P51523 738 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 SLC25A1P53007 311 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ETFDHQ16134 617 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 OCLNQ16625 522 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 C6orf141Q5SZD1 244 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 THEM4Q5T1C6 240 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 TSPO2Q5TGU0 170 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 LCN1P1Q5VSP4 162 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 C9orf135Q5VTT2 229 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 NXNL2Q5VZ03 156 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 TMEM211Q6ICI0 200 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 VWA1Q6PCB0 445 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 MEPCEQ7L2J0 689 aaKnown RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 FAM214BQ7L5A3 538 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ATCAYQ86WG3 371 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 C20orf196Q8IYI0 205 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 OR6V1Q8N148 313 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 PTP4A1Q93096 173 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 TMEM54Q969K7 222 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 MCHR2Q969V1 340 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 ZMYND19Q96E35 227 aaPredicted RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 ZFP3Q96NJ6 502 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 SNX18Q96RF0 628 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 MRPL13Q9BYD1 178 aaKnown RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 SEC61A2Q9H9S3 476 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 SCN3BQ9NY72 215 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 PRSS50Q9UI38 385 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 PROCRQ9UNN8 238 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 B9D1Q9UPM9 204 aa8.64□□□□□ -1.03
CHD8-204ENST00000553622 COA3Q9Y2R0 106 aaPredicted RBP8.64□□□□□ -1.03
CHD8-204ENST00000553622 HEATR1Q9H583 2144 aaKnown RBP8.63□□□□□ -1.03
CHD8-204ENST00000553622 HIVEP3Q5T1R4 2406 aa8.63□□□□□ -1.03
CHD8-204ENST00000553622 IGKV1D-43A0A0B4J1Z2 117 aa8.63□□□□□ -1.03
CHD8-204ENST00000553622 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
CHD8-204ENST00000553622 CCDC182A6NF36 153 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms