RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CHMP1BQ7LBR1 199 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 RBP7Q96R05 134 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 TUBA1CQ9BQE3 449 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 LUZP4Q9P127 313 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ING1Q9UK53 422 aaPredicted RBP12.22□□□□□ -0.45
APEX1-205ENST00000553555 MCTS1Q9ULC4 181 aaKnown RBP12.22□□□□□ -0.45
APEX1-205ENST00000553555 EXOSC1Q9Y3B2 195 aaKnown RBP12.22□□□□□ -0.45
APEX1-205ENST00000553555 CACNA1CQ13936 2221 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 CENPBD1B2RD01 187 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ZNF432O94892 652 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 IGHA1P01876 353 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 CTLA4P16410 223 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ETV1P50549 477 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 CLRN1P58418 232 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ETFDHQ16134 617 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 HIST3H3Q16695 136 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 THEM4Q5T1C6 240 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ZGRF1Q86YA3 2104 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 Q8NA96 180 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 POMGNT2Q8NAT1 580 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ZNF511Q8NB15 262 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 NOXO1Q8NFA2 376 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 OR6K6Q8NGW6 343 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 RNF128Q8TEB7 428 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 TMIGD2Q96BF3 282 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 SARAFQ96BY9 339 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 NMD3Q96D46 503 aaKnown RBP12.22□□□□□ -0.45
APEX1-205ENST00000553555 JAM3Q9BX67 310 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 RACGAP1Q9H0H5 632 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 PRORYQ9H606 182 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 RERGLQ9H628 205 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 TAS2R16Q9NYV7 291 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 CLEC2DQ9UHP7 191 aa12.22□□□□□ -0.45
APEX1-205ENST00000553555 ATMQ13315 3056 aa12.21□□□□□ -0.45
APEX1-205ENST00000553555 ARHGAP21Q5T5U3 1957 aa12.21□□□□□ -0.45
APEX1-205ENST00000553555 DOCK7Q96N67 2140 aa12.21□□□□□ -0.45
APEX1-205ENST00000553555 TLN1Q9Y490 2541 aaKnown RBP12.21□□□□□ -0.45
APEX1-205ENST00000553555 IGKV3D-15A0A087WSY6 115 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 A0A1B0GTH9 108 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 CCDC160A6NGH7 325 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 ZNF99A8MXY4 864 aaPredicted RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 INMTO95050 263 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 PTHP01270 115 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 MRPL3P09001 348 aaKnown RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 LIMS3P0CW19 117 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 LIMS4P0CW20 117 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 CENPAP49450 140 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 FMODQ06828 376 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 UBE2UQ5VVX9 321 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 CARD17Q5XLA6 110 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 DNM1P34Q6PK57 102 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 LYPD4Q6UWN0 246 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 NANOGP1Q8N7R0 232 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 FNDC8Q8TC99 324 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 ABHD3Q8WU67 409 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 RORBQ92753 470 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 MUL1Q969V5 352 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 OR2M2Q96R28 347 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 CNN2Q99439 309 aaKnown RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 ZNF649Q9BS31 505 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 PRRG4Q9BZD6 226 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 MARCH7Q9H992 704 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 ERGIC3Q9Y282 383 aa12.21□□□□□ -0.46
APEX1-205ENST00000553555 NCOA6Q14686 2063 aaPredicted RBP12.21□□□□□ -0.46
APEX1-205ENST00000553555 IGKV1D-43A0A0B4J1Z2 117 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 C12orf71A8MTZ7 269 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 ZNHIT1O43257 154 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 AKAP8O43823 692 aaKnown RBP12.2□□□□□ -0.46
APEX1-205ENST00000553555 KHDRBS3O75525 346 aaKnown RBP12.2□□□□□ -0.46
APEX1-205ENST00000553555 AQP8O94778 261 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 TFP02787 698 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 LCKP06239 509 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 MYL12AP19105 171 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 NTF4P34130 210 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 PTGS2P35354 604 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 BLVRAP53004 296 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 RAB39AQ14964 217 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 SYT6Q5T7P8 510 aaPredicted RBP12.2□□□□□ -0.46
APEX1-205ENST00000553555 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
APEX1-205ENST00000553555 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 ADGRE4PQ86SQ3 457 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 TIGD4Q8IY51 512 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 TMEM123Q8N131 208 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 SMAP2Q8WU79 429 aaPredicted RBP12.2□□□□□ -0.46
APEX1-205ENST00000553555 FCGR1BQ92637 280 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 TMEM54Q969K7 222 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 GPR137Q96N19 417 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 RNF122Q9H9V4 155 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 INPP5EQ9NRR6 644 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 KLHL9Q9P2J3 617 aa12.2□□□□□ -0.46
APEX1-205ENST00000553555 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms