RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 TAS2R5Q9NYW4 299 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF224Q9NZL3 707 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 STX18Q9P2W9 335 aaKnown RBP10.99□□□□□ -0.65
LINC00643-202ENST00000553426 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 SH3GLB1Q9Y371 365 aa10.99□□□□□ -0.65
LINC00643-202ENST00000553426 A0A1W2PPW3 197 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 LRP5LA4QPB2 252 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 DHHO43323 396 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 MGRN1O60291 552 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 LILRA1O75019 489 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 QDPRP09417 244 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 ASAH2BP0C7U1 165 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00643-202ENST00000553426 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
LINC00643-202ENST00000553426 IFNA8P32881 189 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 RBM34P42696 430 aaKnown RBP10.98□□□□□ -0.65
LINC00643-202ENST00000553426 DAP3P51398 398 aaKnown RBP10.98□□□□□ -0.65
LINC00643-202ENST00000553426 PLP2Q04941 152 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 MELKQ14680 651 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 MAPRE2Q15555 327 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 COQ5Q5HYK3 327 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 LIPNQ5VXI9 398 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 RGS7BPQ6MZT1 257 aaPredicted RBP10.98□□□□□ -0.65
LINC00643-202ENST00000553426 ERICH5Q6P6B1 374 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 CCDC80Q76M96 950 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 SLC16A14Q7RTX9 510 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 LRRC17Q8N6Y2 441 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 SLC30A7Q8NEW0 376 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 OR8J3Q8NGG0 315 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 OR1J2Q8NGS2 313 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF75AQ96N20 296 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 SNX18Q96RF0 628 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 SYT3Q9BQG1 590 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 ZNF426Q9BUY5 554 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 KCNN2Q9H2S1 579 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 CDH20Q9HBT6 801 aa10.98□□□□□ -0.65
LINC00643-202ENST00000553426 IQCMA0A1B0GVH7 501 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 CENPBD1B2RD01 187 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 OR5F1O95221 314 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 LYPD3O95274 346 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 MT-ND1P03886 318 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 THY1P04216 161 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 PATE4P0C8F1 98 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 PGA4P0DJD7 388 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 PGA3P0DJD8 388 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 NR2C1P13056 603 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 FUT1P19526 365 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 TCN1P20061 433 aaPredicted RBP10.97□□□□□ -0.65
LINC00643-202ENST00000553426 ACHEP22303 614 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 SRP14P37108 136 aaKnown RBP10.97□□□□□ -0.65
LINC00643-202ENST00000553426 RAD52P43351 418 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 ALDH3B1P43353 468 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 RIN1Q13671 783 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 NKPD1Q17RQ9 610 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 CR1LQ2VPA4 569 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 NRN1LQ496H8 165 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 LRFN4Q6PJG9 635 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 DEF8Q6ZN54 512 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 IL17RELQ6ZVW7 336 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 CARM1Q86X55 608 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 WDFY1Q8IWB7 410 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 PCYOX1LQ8NBM8 494 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 OR4K5Q8NGD3 323 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 OR4D11Q8NGI4 311 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 SNX33Q8WV41 574 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 RDH5Q92781 318 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 LRRC58Q96CX6 371 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 SGTBQ96EQ0 304 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 SH3GL3Q99963 347 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM120AQ9BXJ8 343 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 TMEFF2Q9UIK5 374 aaPredicted RBP10.97□□□□□ -0.65
LINC00643-202ENST00000553426 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
LINC00643-202ENST00000553426 BBIP1A8MTZ0 92 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 LYNX1G3V0Z9 82 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 FBP2O00757 339 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 IGF2P01344 180 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 LCKP06239 509 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 LYNX1P0DP58 116 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 THRBP10828 461 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 GPR6P46095 362 aaPredicted RBP10.96□□□□□ -0.65
LINC00643-202ENST00000553426 ARFIP2P53365 341 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM33P57088 247 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 RPL18Q07020 188 aaKnown RBP10.96□□□□□ -0.65
LINC00643-202ENST00000553426 FXNQ16595 210 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 MOGQ16653 247 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 RABL3Q5HYI8 236 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM154Q6P9G4 183 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 TMEM239Q8WW34 195 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 C11orf40Q8WZ69 217 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 MCHR2Q969V1 340 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 PRSS27Q9BQR3 290 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 BCL2L14Q9BZR8 327 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 MEPEQ9NQ76 525 aaPredicted RBP10.96□□□□□ -0.65
LINC00643-202ENST00000553426 INIPQ9NRY2 104 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 GID8Q9NWU2 228 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 SLCO1C1Q9NYB5 712 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 RIMS3Q9UJD0 308 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 FZR1Q9UM11 496 aa10.96□□□□□ -0.65
LINC00643-202ENST00000553426 MED31Q9Y3C7 131 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms