RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CLSTN2Q9H4D0 955 aa3.6□□□□□ -1.83
SCFD1-209ENST00000553280 ING4Q9UNL4 249 aa3.6□□□□□ -1.83
SCFD1-209ENST00000553280 SLC17A4Q9Y2C5 497 aa3.6□□□□□ -1.83
SCFD1-209ENST00000553280 MROH5Q6ZUA9 1318 aa3.6□□□□□ -1.83
SCFD1-209ENST00000553280 IGKV1D-13A0A0B4J2D9 117 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 FAM231BA6NCW3 169 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 A8MUA0 341 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 BOLA2-SMG1P6H3BVE0 249 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 SLC31A2O15432 143 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 SUPT7LO94864 414 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 SERPINA5P05154 406 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 IGKV1-13P0DP09 117 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 HPGDP15428 266 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 ZNF250P15622 560 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 AQP2P41181 271 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 RORCP51449 518 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 EIF3EP60228 445 aaKnown RBP3.59□□□□□ -1.83
SCFD1-209ENST00000553280 TIMM10P62072 90 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 IRF8Q02556 426 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 FZD2Q14332 565 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 KIAA0087Q14695 138 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 BEX5Q5H9J7 111 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 CTRB2Q6GPI1 263 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 THOC6Q86W42 341 aaKnown RBP3.59□□□□□ -1.83
SCFD1-209ENST00000553280 RALGPS2Q86X27 583 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-209ENST00000553280 LYG1Q8N1E2 194 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 LINC00612Q8N6U2 182 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 ZNF502Q8TBZ5 544 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 FANK1Q8TC84 345 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 DTX3LQ8TDB6 740 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 GPX8Q8TED1 209 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 ANKRD9Q96BM1 317 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-209ENST00000553280 DUS3LQ96G46 650 aaKnown RBP3.59□□□□□ -1.83
SCFD1-209ENST00000553280 BLZF1Q9H2G9 400 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 AHSPQ9NZD4 102 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 MTCH1Q9NZJ7 389 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 LGALS13Q9UHV8 139 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 PLEKHG1Q9ULL1 1385 aa3.59□□□□□ -1.83
SCFD1-209ENST00000553280 ARPC4-TTLL3A0A0A6YYG9 625 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 A0A0G2JN53 185 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 GLYATL1P3A0A0U1RQE8 302 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 CCNB2O95067 398 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 FGFR1OPO95684 399 aaKnown RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 FOLR1P15328 257 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 STX17P56962 302 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 RAB11AP62491 216 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ACTA2P62736 377 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ACTG2P63267 376 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ACTC1P68032 377 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ACTA1P68133 377 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ORC2Q13416 577 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 AQP6Q13520 282 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 SF3A2Q15428 464 aaKnown RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 RAB11BQ15907 218 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 PGGHGQ32M88 737 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 CCDC14Q49A88 953 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 HIKESHIQ53FT3 197 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 AGBL2Q5U5Z8 902 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 STUMQ69YW2 141 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 ZNF544Q6NX49 715 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 PRELID2Q8N945 189 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 OR9G4Q8NGQ1 327 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 OR2G3Q8NGZ4 309 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 NDRG1Q92597 394 aaKnown RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 TMEM101Q96IK0 257 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 TDRD3Q9H7E2 651 aaKnown RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 CCL28Q9NRJ3 127 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 HRASLS2Q9NWW9 162 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 MTRF1LQ9UGC7 380 aaKnown RBP3.58□□□□□ -1.84
SCFD1-209ENST00000553280 GOLT1BQ9Y3E0 138 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 TNIKQ9UKE5 1360 aa3.58□□□□□ -1.84
SCFD1-209ENST00000553280 IGKV3D-20A0A0C4DH25 116 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 A0A1B0GVI7 797 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TRDMT1O14717 391 aaKnown RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 FAM189A1O60320 539 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 PLEKP08567 350 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 GKN3PP0CG01 181 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TDGF1P13385 188 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 MSR1P21757 451 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 ZBTB25P24278 435 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CD1BP29016 333 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TDGF1P3P51864 188 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CLDN18P56856 261 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 WDR43Q15061 677 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 RSBN1Q5VWQ0 802 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 OTPQ5XKR4 325 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 RNF165Q6ZSG1 346 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CMC1Q7Z7K0 106 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TGIF2LYQ8IUE0 185 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TMEM61Q8N0U2 210 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 C8orf31Q8N9H6 132 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 TTC29Q8NA56 475 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 OR10G9Q8NGN4 311 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 OR5B3Q8NH48 314 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 SDR42E1Q8WUS8 393 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 FAM151AQ8WW52 585 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CAPSLQ8WWF8 208 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms