RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 BSXQ3C1V8 233 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 FFAR4Q5NUL3 377 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 DNM1P34Q6PK57 102 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 Q6ZSR9 355 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 USP43Q70EL4 1123 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 RALGPS2Q86X27 583 aaPredicted RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 RIBC1Q8N443 379 aaPredicted RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 OR5B3Q8NH48 314 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ZPLD1Q8TCW7 415 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 FAM172AQ8WUF8 416 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 NTNG2Q96CW9 530 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 RAB3CQ96E17 227 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 STACQ99469 402 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ZNF670Q9BS34 389 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 CABLES2Q9BTV7 478 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 SLC22A4Q9H015 551 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 REEP4Q9H6H4 257 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
VPS29-210ENST00000552130 EXD2Q9NVH0 621 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 CLN6Q9NWW5 311 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 ARID2Q68CP9 1835 aa5.34□□□□□ -1.55
VPS29-210ENST00000552130 NACADO15069 1562 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NEDD4P46934 1319 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ZNF521Q96K83 1311 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ASPDHA6ND91 283 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 OR5B21A6NL26 309 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 VSTM2BA6NLU5 285 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 IDSB3KWA1 339 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ENSAO43768 121 aaKnown RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 ALOX12BO75342 701 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 HPP00738 406 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 IFNA2P01563 188 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 HBE1P02100 147 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 APOEP02649 317 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 CDK1P06493 297 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 TACSTD2P09758 323 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 EFNA1P20827 205 aaPredicted RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 SSTR2P30874 369 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 SAA4P35542 130 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 SSBP2P81877 361 aaPredicted RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 ZNF33BQ06732 778 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 AESQ08117 197 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ARL16Q0P5N6 197 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 FOXF2Q12947 444 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS29-210ENST00000552130 OR5I1Q13606 314 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 GTF2H2Q13888 395 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 CARD16Q5EG05 197 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ATP1A1-AS1Q5TC04 95 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 OGFRL1Q5TC84 451 aaPredicted RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 SYPL2Q5VXT5 272 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 METTL21CQ5VZV1 264 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 OR8G2PQ6IF36 304 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NIPAL1Q6NVV3 410 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 GTF2H2CQ6P1K8 395 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 LCLAT1Q6UWP7 414 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ACOT7LQ6ZUV0 252 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ASB18Q6ZVZ8 466 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NT5DC3Q86UY8 548 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 TRAPPC5Q8IUR0 188 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NAXDQ8IW45 347 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 BBS7Q8IWZ6 715 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 ACBD4Q8NC06 268 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 MDS2Q8NDY4 140 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NEK7Q8TDX7 302 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 IGFBPL1Q8WX77 278 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 GTF3AQ92664 365 aaKnown RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 NSL1Q96IY1 281 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 NOL4LQ96MY1 436 aaPredicted RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 Q9HAA7 133 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 C6orf50Q9HD87 102 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 IFT46Q9NQC8 304 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 DIABLOQ9NR28 239 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 TMEM30AQ9NV96 361 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 GID8Q9NWU2 228 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 SDHAF2Q9NX18 166 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 TEX10Q9NXF1 929 aaPredicted RBP5.33□□□□□ -1.56
VPS29-210ENST00000552130 IL36RNQ9UBH0 155 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 COPS3Q9UNS2 423 aa5.33□□□□□ -1.56
VPS29-210ENST00000552130 METP08581 1390 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 RNF212BA8MTL3 300 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 H7C0C1 242 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 INPP4BO15327 924 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 HPGDSO60760 199 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SRP72O76094 671 aaKnown RBP5.32□□□□□ -1.56
VPS29-210ENST00000552130 SNAPINO95295 136 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 MPZL1O95297 269 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ESRRBO95718 433 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ZNF35P13682 527 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 COX5AP20674 150 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 CCNE1P24864 410 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
VPS29-210ENST00000552130 RASSF2P50749 326 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 FBXW4P57775 412 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 TAS2R60P59551 318 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SPCS3P61009 180 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 LTBQ06643 244 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ILF3Q12906 894 aaKnown RBP eCLIP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms