RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 DEFA6Q01524 100 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 RBBP4Q09028 425 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 NXNQ6DKJ4 435 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 NFKBIDQ8NI38 313 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 C11orf40Q8WZ69 217 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 MAELQ96JY0 434 aaKnown RBP18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 NTN4Q9HB63 628 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 TMEM38BQ9NVV0 291 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 SLCO1C1Q9NYB5 712 aa18.39■□□□□ 0.53
SMARCD1-212ENST00000551966 TRPC5OSA6NMA1 111 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 C5orf58C9J3I9 102 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 C11orf98E9PRG8 122 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 FPR2P25090 351 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 TEKQ02763 1124 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 FADDQ13158 208 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 TSTQ16762 297 aaKnown RBP18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 KRT71Q3SY84 523 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 SLC2A7Q6PXP3 512 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 C10orf53Q8N6V4 93 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 OR5J2Q8NH18 312 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 OR6X1Q8NH79 312 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 TMEM27Q9HBJ8 222 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 CDH20Q9HBT6 801 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 TCF7L2Q9NQB0 619 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 DECR2Q9NUI1 292 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 TAS2R5Q9NYW4 299 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 SLC25A37Q9NYZ2 338 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 WNK2Q9Y3S1 2297 aa18.38■□□□□ 0.53
SMARCD1-212ENST00000551966 CLDN25C9JDP6 229 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 RGS16O15492 202 aaPredicted RBP18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 ADORA3P0DMS8 318 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 MAKP20794 623 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 GATA3P23771 443 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 LCN2P80188 198 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 HFEQ30201 348 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 TMEM255AQ5JRV8 349 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 LINC00114Q6XXX2 140 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 SLC35D2Q76EJ3 337 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 ZNF771Q7L3S4 317 aaPredicted RBP18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 MSRB3Q8IXL7 192 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 SIGLECL1Q8N7X8 197 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 SNX33Q8WV41 574 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 RAB1CQ92928 201 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 DUX5Q96PT3 197 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 PAIP2Q9BPZ3 127 aaKnown RBP18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 TMEM43Q9BTV4 400 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 RNF121Q9H920 327 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 KCNK9Q9NPC2 374 aa18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 TESQ9UGI8 421 aaKnown RBP18.37■□□□□ 0.53
SMARCD1-212ENST00000551966 DHHO43323 396 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 TPD52L2O43399 206 aaKnown RBP18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 SNNO75324 88 aaPredicted RBP18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 SNAP29O95721 258 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 IGHV3-13P01766 116 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 ZFP36P26651 326 aaKnown RBP18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 GLO1Q04760 184 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 TNFAIP8L3Q5GJ75 292 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 MAVSQ7Z434 540 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 OR4K5Q8NGD3 323 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 C1orf147Q96MC9 270 aaPredicted RBP18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 RAD21L1Q9H4I0 556 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 SELENONQ9NZV5 590 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 SLAMF8Q9P0V8 285 aa18.36■□□□□ 0.53
SMARCD1-212ENST00000551966 MT-ATP6P00846 226 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 PRTN3P24158 256 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 RGS8P57771 180 aaPredicted RBP18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 CDK6Q00534 326 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 HNRNPA0Q13151 305 aaKnown RBP18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 REEP3Q6NUK4 255 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 TMEM53Q6P2H8 277 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 TREML4Q6UXN2 200 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 ICA1LQ8NDH6 482 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 CCL17Q92583 94 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 TIMD4Q96H15 378 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 OR52B2Q96RD2 323 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 BCL2L14Q9BZR8 327 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 SAP30LQ9HAJ7 183 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 THAP1Q9NVV9 213 aa18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 LEF1Q9UJU2 399 aaPredicted RBP18.35■□□□□ 0.53
SMARCD1-212ENST00000551966 TGP01266 2768 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 UBOX5O94941 541 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 MFN2O95140 757 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 IGHV1-46P01743 117 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 QDPRP09417 244 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 WDR4P57081 412 aaKnown RBP18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 MELKQ14680 651 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 TBC1D28Q2M2D7 210 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 SPRNQ5BIV9 151 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 DOK3Q7L591 496 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 RETREG3Q86VR2 466 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 BCL6BQ8N143 479 aaPredicted RBP18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 CPEB3Q8NE35 698 aaKnown RBP18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 ZNF566Q969W8 418 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 SLC25A44Q96H78 314 aaPredicted RBP18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 GAL3ST1Q99999 423 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 UNKLQ9H9P5 680 aaKnown RBP18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 MMP26Q9NRE1 261 aa18.34■□□□□ 0.53
SMARCD1-212ENST00000551966 ZNF69Q9UC07 566 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms