RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NRARPQ7Z6K4 114 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 CELF2-AS1Q8N7Q2 184 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 OR10AC1Q8NH08 325 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 MFSD8Q8NHS3 518 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 NEURL2Q9BR09 285 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 SDHAF3Q9NRP4 125 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 IGLV1-36A0A0B4J1U3 117 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 C9orf172C9J069 976 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 ZNF883P0CG24 379 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 SUMO3P55854 103 aaPredicted RBP18.8■□□□□ 0.6
PRDM4-205ENST00000550376 C6orf15Q6UXA7 325 aaPredicted RBP18.8■□□□□ 0.6
PRDM4-205ENST00000550376 NDUFAF7Q7L592 441 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 SAMD12Q8N8I0 201 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 NSMAFQ92636 917 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 KLHL15Q96M94 604 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 PROK2Q9HC23 129 aa18.8■□□□□ 0.6
PRDM4-205ENST00000550376 PCNX2A6NKB5 2137 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 NPIPA5E9PKD4 350 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 EVX1P49640 407 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 ADAM8P78325 824 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 HSF1Q00613 529 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 EXT1Q16394 746 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 ZNF554Q86TJ5 538 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 OR51A4Q8NGJ6 313 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 OR5H6Q8NGV6 325 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 ITFG2Q969R8 447 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 MAP6Q96JE9 813 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 CCDC32Q9BV29 185 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 NPIPA1Q9UND3 350 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 GTF2A1LQ9UNN4 478 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 TRAPPC4Q9Y296 219 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 TP53I11O14683 189 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 ABHD16AO95870 558 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 KRT8P05787 483 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 EIF4EP06730 217 aaKnown RBP18.79■□□□□ 0.6
PRDM4-205ENST00000550376 PPP3R1P63098 170 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 SPEM2Q0P670 501 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 HBMQ6B0K9 141 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 MRGPRX4Q96LA9 322 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 CHST11Q9NPF2 352 aa18.79■□□□□ 0.6
PRDM4-205ENST00000550376 ZFHX4Q86UP3 3567 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 SNRPBP14678 240 aaKnown RBP18.78■□□□□ 0.6
PRDM4-205ENST00000550376 CD53P19397 219 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 RAB3BP20337 219 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 SSR4P51571 173 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 CEP78Q5JTW2 689 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 FAM220AQ7Z4H9 259 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 OTOSQ8NHW6 89 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 MRPS18BQ9Y676 258 aaKnown RBP18.78■□□□□ 0.6
PRDM4-205ENST00000550376 FKBP7Q9Y680 259 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 COL27A1Q8IZC6 1860 aaPredicted RBP18.78■□□□□ 0.6
PRDM4-205ENST00000550376 GAAP10253 952 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 ATF1P18846 271 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 BIDP55957 195 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 OR2B6P58173 313 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 TRAM1Q15629 374 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 XKRXQ6PP77 449 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 CORO6Q6QEF8 472 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 LINC00346Q8IVM7 164 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 ZNF433Q8N7K0 673 aaPredicted RBP18.78■□□□□ 0.6
PRDM4-205ENST00000550376 M1APQ8TC57 530 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 ASB10Q8WXI3 467 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 ELOVL3Q9HB03 270 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 SACM1LQ9NTJ5 587 aa18.78■□□□□ 0.6
PRDM4-205ENST00000550376 VSX1Q9NZR4 365 aaPredicted RBP18.78■□□□□ 0.6
PRDM4-205ENST00000550376 A0A0G2JMM0 328 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 A0A0G2JMP0 313 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 A0A0X1KG70 313 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 A0A1W2PPB8 328 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 A0A1W2PRS3 328 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 KIR3DP1A8MWS1 328 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.77■□□□□ 0.6
PRDM4-205ENST00000550376 ZNF208O43345 1280 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 MSX1P28360 303 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 RAB15P59190 212 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 CARD17Q5XLA6 110 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 ESPNLQ6ZVH7 1005 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 OR4M2Q8NGB6 313 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 STRADBQ9C0K7 418 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 SERINC1Q9NRX5 453 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 B3GAT1Q9P2W7 334 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 EXTL2Q9UBQ6 330 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 ZNF281Q9Y2X9 895 aa18.77■□□□□ 0.6
PRDM4-205ENST00000550376 URB1O60287 2271 aaKnown RBP18.77■□□□□ 0.59
PRDM4-205ENST00000550376 HSF2Q03933 536 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 TOMM20Q15388 145 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 CCDC58Q4VC31 144 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 OPN5Q6U736 354 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 PRSS35Q8N3Z0 413 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 DERL3Q96Q80 235 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 PPP1R3EQ9H7J1 279 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 PCDHGB2Q9Y5G2 931 aa18.77■□□□□ 0.59
PRDM4-205ENST00000550376 IGLV3-32A0A0A0MS00 114 aa18.76■□□□□ 0.59
PRDM4-205ENST00000550376 TRIM3O75382 744 aaPredicted RBP18.76■□□□□ 0.59
PRDM4-205ENST00000550376 TACSTD2P09758 323 aa18.76■□□□□ 0.59
PRDM4-205ENST00000550376 SRMP19623 302 aa18.76■□□□□ 0.59
PRDM4-205ENST00000550376 RFX2P48378 723 aa18.76■□□□□ 0.59
PRDM4-205ENST00000550376 CAMK2DQ13557 499 aa18.76■□□□□ 0.59
PRDM4-205ENST00000550376 ALKBH1Q13686 389 aaKnown RBP18.76■□□□□ 0.59
PRDM4-205ENST00000550376 HSD17B12Q53GQ0 312 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms