RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 BTNL2Q9UIR0 455 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 CLEC4EQ9ULY5 219 aa4.31□□□□□ -1.72
HCFC2-204ENST00000550335 NUP188Q5SRE5 1749 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 PKD1L3Q7Z443 1732 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 IGLV3-22A0A075B6J6 115 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 DYNC1I1O14576 645 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 RAB29O14966 203 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 CGAP01215 116 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 FGGP02679 453 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 MAGEA1P43355 309 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 TNNT2P45379 298 aaPredicted RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 VDAC2P45880 294 aaPredicted RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 MRPS22P82650 360 aaKnown RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 LPAL2Q16609 132 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 KLF17Q5JT82 389 aaPredicted RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 TMEM179BQ7Z7N9 219 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 BIVMQ86UB2 503 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 PPP1R27Q86WC6 154 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 RDH10Q8IZV5 341 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 FANK1Q8TC84 345 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 ACMSDQ8TDX5 336 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 CFAP53Q96M91 514 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 HIST1H4GQ99525 98 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 SLC29A1Q99808 456 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 EBF4Q9BQW3 602 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 PELOQ9BRX2 385 aaKnown RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 C19orf24Q9BVV8 132 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 SELENOIQ9C0D9 397 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 CCNB1IP1Q9NPC3 277 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 ADAP2Q9NPF8 381 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 PDP1Q9P0J1 537 aaPredicted RBP4.3□□□□□ -1.72
HCFC2-204ENST00000550335 Q9UF83 564 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 KIF25Q9UIL4 384 aa4.3□□□□□ -1.72
HCFC2-204ENST00000550335 KIR2DL5BA0A0G2JN68 375 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KIR2DL5BA0A0G2JPC4 375 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 CCL21O00585 134 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 RALBP11234 206 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 GZMAP12544 262 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 PSMB1P20618 241 aaKnown RBP4.29□□□□□ -1.72
HCFC2-204ENST00000550335 RRM2P31350 389 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 UQCRFS1P47985 274 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 ARFRP1Q13795 201 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KYAT1Q16773 422 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 SOHLH1Q5JUK2 328 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 C1orf146Q5VVC0 180 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 TWF2Q6IBS0 349 aaKnown RBP4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 C1orf94Q6P1W5 598 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 TMEM53Q6P2H8 277 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 TRIM40Q6P9F5 258 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 OTUD6AQ7L8S5 288 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF546Q86UE3 836 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KATNAL2Q8IYT4 538 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KIR2DL5AQ8N109 375 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 ZNF525Q8N782 197 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 OR9G1Q8NH87 305 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 KIR2DL5BQ8NHK3 375 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 GPR151Q8TDV0 419 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 MED8Q96G25 268 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 ITCHQ96J02 903 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 GSDMAQ96QA5 445 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 NICN1Q9BSH3 213 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 MRPL22Q9NWU5 206 aaKnown RBP4.29□□□□□ -1.72
HCFC2-204ENST00000550335 DCDC2Q9UHG0 476 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 CSAG2Q9Y5P2 127 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 SHANK3Q9BYB0 1731 aa4.29□□□□□ -1.72
HCFC2-204ENST00000550335 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 PALLDQ8WX93 1383 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 RGPD2P0DJD1 1756 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 ARPC4-TTLL3A0A0A6YYG9 625 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 SOX15O60248 233 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 SERF1AO75920 110 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 SNAPINO95295 136 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 CLIC3O95833 236 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 KRT6AP02538 564 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 SEMG1P04279 462 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 C2P06681 752 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 ERCC1P07992 297 aaPredicted RBP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 TBPP20226 339 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 ZP3P21754 424 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 RORAP35398 523 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 RBMXP38159 391 aaKnown RBP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 GLP1RP43220 463 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 ARRB1P49407 418 aaPredicted RBP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 TMED10P49755 219 aaKnown RBP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 YWHAGP61981 247 aaKnown RBP eCLIP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 KIAA0040Q15053 153 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 HADHQ16836 314 aaKnown RBP4.28□□□□□ -1.72
HCFC2-204ENST00000550335 PPM1LQ5SGD2 360 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 GPR157Q5UAW9 335 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 CNIH2Q6PI25 160 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 SLC39A11Q8N1S5 342 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 C6orf223Q8N319 242 aa4.28□□□□□ -1.72
HCFC2-204ENST00000550335 EID2Q8N6I1 236 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms