RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ZNF613Q6PF04 617 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 SLC35D2Q76EJ3 337 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
TROAP-211ENST00000549891 HIPK4Q8NE63 616 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 OR4M2Q8NGB6 313 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 ZNF519Q8TB69 540 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 TMEM54Q969K7 222 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 ZNF566Q969W8 418 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 BCL2L14Q9BZR8 327 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 RNF121Q9H920 327 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 NKIRAS2Q9NYR9 191 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
TROAP-211ENST00000549891 ANGPT4Q9Y264 503 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
TROAP-211ENST00000549891 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 LRRN3E7EW58 273 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 J3QLI3 93 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
TROAP-211ENST00000549891 RNF13O43567 381 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 CHP2O43745 196 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 RGS9O75916 674 aaPredicted RBP11.6□□□□□ -0.55
TROAP-211ENST00000549891 MPZL1O95297 269 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 SNAP29O95721 258 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 LCKP06239 509 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 PATE4P0C8F1 98 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 FAM157BP0CG42 384 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 GPX2P18283 190 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 AQP1P29972 269 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 CRYBB2P43320 205 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 CCL8P80075 99 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 PLP2Q04941 152 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 ZP4Q12836 540 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 ALKBH6Q3KRA9 238 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 BLOC1S3Q6QNY0 202 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 EPGNQ6UW88 154 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 MSRB3Q8IXL7 192 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 ZBTB9Q96C00 473 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 SPDL1Q96EA4 605 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 TIMD4Q96H15 378 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 SLC25A44Q96H78 314 aaPredicted RBP11.6□□□□□ -0.55
TROAP-211ENST00000549891 MCHR1Q99705 422 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 TCF7L2Q9NQB0 619 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 G6PC2Q9NQR9 355 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 NANSQ9NR45 359 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 DECR2Q9NUI1 292 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 CCDC167Q9P0B6 97 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 USH1CQ9Y6N9 552 aa11.6□□□□□ -0.55
TROAP-211ENST00000549891 LOC105371242A0A075B767 164 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 CLDN25C9JDP6 229 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 DHHO43323 396 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 TPD52L2O43399 206 aaKnown RBP11.59□□□□□ -0.55
TROAP-211ENST00000549891 MGRN1O60291 552 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 TPST2O60704 377 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 CDC14BO60729 498 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 MFN2O95140 757 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 BCL10O95999 233 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 CLPTM1O96005 669 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 DRD4P21917 467 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 GATA3P23771 443 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 ARFIP2P53365 341 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 MVKQ03426 396 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 HFEQ30201 348 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
TROAP-211ENST00000549891 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 WDR88Q6ZMY6 472 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 SLC16A14Q7RTX9 510 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 WDFY1Q8IWB7 410 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 SH3GL3Q99963 347 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 SLCO1B3Q9NPD5 702 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 SLAMF8Q9P0V8 285 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.59□□□□□ -0.55
TROAP-211ENST00000549891 ZNF229Q9UJW7 825 aa11.59□□□□□ -0.55
TROAP-211ENST00000549891 PLPP2O43688 288 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 TGDSO95455 350 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 CH25HO95992 272 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 IGHG1P01857 330 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 QDPRP09417 244 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 PGA3P0DJD8 388 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 ZNF84P51523 738 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 UCP2P55851 309 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 CLRN1P58418 232 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 ZNF74Q16587 644 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 PAGE3Q5JUK9 113 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 FAM209AQ5JX71 171 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 AVPI1Q5T686 147 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 DCAF12L2Q5VW00 463 aa11.58□□□□□ -0.56
TROAP-211ENST00000549891 LRFN4Q6PJG9 635 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms