RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TP53BP1Q12888 1972 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 PTPRJQ12913 1337 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 CACNA1HO95180 2353 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 IGLV3-10A0A075B6K4 115 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 CYSRT1A8MQ03 144 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 ANKRD63C9JTQ0 380 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SULT2B1O00204 365 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 RS1O15537 224 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 COCHO43405 550 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 CACNG3O60359 315 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 MTX2O75431 263 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 PRB1P04280 392 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF44P15621 663 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 WARSP23381 471 aaKnown RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 CSNK1EP49674 416 aaKnown RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TPMTP51580 245 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 RPS14P62263 151 aaKnown RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 ILKQ13418 452 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 ISXQ2M1V0 245 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 C10orf120Q5SQS8 335 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TMEM225Q6GV28 225 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SYT10Q6XYQ8 523 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 FRA10AC1Q70Z53 315 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 MOB1BQ7L9L4 216 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TRPM8Q7Z2W7 1104 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TPRA1Q86W33 373 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 PPP1R27Q86WC6 154 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TMEM25Q86YD3 366 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 OR4D9Q8NGE8 314 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 PAQR8Q8TEZ7 354 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 RNF139Q8WU17 664 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 FGF11Q92914 225 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 FGGYQ96C11 551 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SMARCD1Q96GM5 515 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SLC41A3Q96GZ6 507 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SERAC1Q96JX3 654 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 PKNOX2Q96KN3 472 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 PKMYT1Q99640 499 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 NAT10Q9H0A0 1025 aaKnown RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 LHX5Q9H2C1 402 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF385DQ9H6B1 395 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 SMYD3Q9H7B4 428 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 VPS37BQ9H9H4 285 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TM9SF3Q9HD45 589 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 APMAPQ9HDC9 416 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 RAB18Q9NP72 206 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 DMAP1Q9NPF5 467 aaPredicted RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 NUDT15Q9NV35 164 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 WARS2Q9UGM6 360 aaKnown RBP2.93□□□□□ -1.94
PTCH1-216ENST00000548379 TP53TG3Q9ULZ0 132 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 POLDIP2Q9Y2S7 368 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 MAD1L1Q9Y6D9 718 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 LRRK1Q38SD2 2015 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 DCHS1Q96JQ0 3298 aa2.93□□□□□ -1.94
PTCH1-216ENST00000548379 RAI1Q7Z5J4 1906 aaPredicted RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 KIAA1671Q9BY89 1806 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 C15orf38-AP3S2A0A0A6YYH1 394 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 IGHV7-81A0A0B4J1V7 117 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 LRP5LA4QPB2 252 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 GOLGA8IPA6NC78 632 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 METTL21EPA6NDL7 271 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 FAM47DPA6NHR8 397 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 GOLGA8JA6NMD2 632 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 HCRTO43612 131 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PRKYO43930 277 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 GNA14O95837 355 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 HSPB1P04792 205 aaKnown RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PNMTP11086 282 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 VDAC1P21796 283 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 GCKP35557 465 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PTGDSP41222 190 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CASP4P49662 377 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 P2RY4P51582 365 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PRKXP51817 358 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CCDC173Q0VFZ6 552 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 MRPL28Q13084 256 aaKnown RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CUL1Q13616 776 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ELAVL3Q14576 367 aaKnown RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 IL17AQ16552 155 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 RNF212Q495C1 297 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 TP53I3Q53FA7 332 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 TFAP2EQ6VUC0 442 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ZYG11AQ6WRX3 759 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CCDC73Q6ZRK6 1079 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 DNM1P46Q6ZS02 220 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 NLRP9Q7RTR0 991 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 VSTM4Q8IW00 320 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CCDC65Q8IXS2 484 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF679Q8IYX0 411 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ZBED8Q8IZ13 594 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CEND1Q8N111 149 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 TMEM123Q8N131 208 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CLEC4FQ8N1N0 589 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ARHGAP18Q8N392 663 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF557Q8N988 423 aaPredicted RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 OR52K2Q8NGK3 314 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 DDI1Q8WTU0 396 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 CCDC127Q96BQ5 260 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PSKH2Q96QS6 385 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms