RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SMOXQ9NWM0 555 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 PACSIN2Q9UNF0 486 aaPredicted RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 RFNGQ9Y644 331 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 ASH1LQ9NR48 2969 aaKnown RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 ANKRD12Q6UB98 2062 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 FANCIQ9NVI1 1328 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TRAV40A0A0B4J280 105 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 ZNF233A6NK53 670 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 RPL36A-HNRNPH2H7BZ11 118 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 KMOO15229 486 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TOM1O60784 492 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TBX19O60806 448 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 RCBTB2O95199 551 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 GAPDHP04406 335 aaKnown RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 SMIM10L1P0DMW3 83 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 PSMC3P17980 439 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 CCR1P32246 355 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 CRYBB1P53674 252 aaPredicted RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 POLR2FP61218 127 aaKnown RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 RAP1AP62834 184 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 ERVK-25P63136 954 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 CDK16Q00536 496 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TPD52L1Q16890 204 aaPredicted RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 ZNF684Q5T5D7 378 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 PRR9Q5T870 116 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 HES5Q5TA89 166 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TMEM225Q6GV28 225 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 STRADAQ7RTN6 431 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 PLA2G4DQ86XP0 818 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 KRTAP13-1Q8IUC0 172 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 VSTM4Q8IW00 320 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 RIMKLAQ8IXN7 391 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 MFSD9Q8NBP5 474 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 SDR42E1Q8WUS8 393 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 MED8Q96G25 268 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 SMIM10Q96HG1 83 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 MS4A4EQ96PG1 132 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 TSSK3Q96PN8 268 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 MTMR9Q96QG7 549 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 FOXC2Q99958 501 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 FAIM2Q9BWQ8 316 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 RAB33BQ9H082 229 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 RPP21Q9H633 154 aaKnown RBP1.12□□□□□ -2.23
CEP290-204ENST00000547926 ADAP2Q9NPF8 381 aa1.12□□□□□ -2.23
CEP290-204ENST00000547926 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.12□□□□□ -2.23
CEP290-204ENST00000547926 KALRNO60229 2985 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 MSH6P52701 1360 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 GCN1Q92616 2671 aaKnown RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 K7EM74 188 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 MPZL1O95297 269 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 LINC00869P0C866 280 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 HSMCR30P0CW71 290 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 RNASE2P10153 161 aaKnown RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 NCK1P16333 377 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 OPRD1P41143 372 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 GPR6P46095 362 aaPredicted RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 DUSP3P51452 185 aaPredicted RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 CCR8P51685 355 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 SUB1P53999 127 aaKnown RBP eCLIP1.11□□□□□ -2.23
CEP290-204ENST00000547926 ESRRGP62508 458 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 SCRN3Q0VDG4 424 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 PRSS8Q16651 343 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 COX19Q49B96 90 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 FILIP1LQ4L180 1135 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 SFT2D3Q587I9 215 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 HSP90AA5PQ58FG0 334 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 PDZK1Q5T2W1 519 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 OR4F3Q6IEY1 312 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 TRIM40Q6P9F5 258 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 NEGR1Q7Z3B1 354 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 WDR86Q86TI4 376 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 OR10G4Q8NGN3 311 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 MAGEE2Q8TD90 523 aaPredicted RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 PYROXD1Q8WU10 500 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 TMOD2Q9NZR1 351 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 BFARQ9NZS9 450 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 FBN1P35555 2871 aaKnown RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 MYO9AB2RTY4 2548 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 COL24A1Q17RW2 1714 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 GPATCH8Q9UKJ3 1502 aaKnown RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 C5orf42Q9H799 3197 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 SDK2Q58EX2 2172 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 BAZ1AQ9NRL2 1556 aaPredicted RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 COL5A1P20908 1838 aaPredicted RBP1.11□□□□□ -2.23
CEP290-204ENST00000547926 CC2D2AQ9P2K1 1620 aa1.11□□□□□ -2.23
CEP290-204ENST00000547926 CCDC182A6NF36 153 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 UPK3AO75631 287 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 KRT8P05787 483 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 HSPA5P11021 654 aaKnown RBP1.1□□□□□ -2.23
CEP290-204ENST00000547926 TCN1P20061 433 aaPredicted RBP1.1□□□□□ -2.23
CEP290-204ENST00000547926 CYB561P49447 251 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 ELP6Q0PNE2 266 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 PON3Q15166 354 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 DNLZQ5SXM8 178 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 DUX4L9Q6RFH8 374 aaPredicted RBP1.1□□□□□ -2.23
CEP290-204ENST00000547926 UQCC3Q6UW78 93 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 NTM-AS1Q6ZSK4 140 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 UTS2BQ765I0 119 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 NUDCD3Q8IVD9 361 aa1.1□□□□□ -2.23
CEP290-204ENST00000547926 MMAAQ8IVH4 418 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms