RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PYGO1Q9Y3Y4 419 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 KPTNQ9Y664 436 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CACNA1FO60840 1977 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 AKAP12Q02952 1782 aa3.4□□□□□ -1.86
SCAF11-210ENST00000547654 A0A1B0GTH9 108 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 GSTTP1A0A1W2PQM5 241 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PDZK1P1A8MUH7 402 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF487B1APH4 448 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 G3V3Y1 287 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 NR5A2O00482 541 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SNAP91O60641 907 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 GPX5O75715 221 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SCELO95171 688 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 LALBAP00709 142 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 HLA-HP01893 362 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 IFNW1P05000 195 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 HCKP08631 526 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 HOXD4P09016 255 aaPredicted RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 CT45A10P0DMU9 189 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PMCHP20382 165 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 IDSP22304 550 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 CLIP1P30622 1438 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 RORAP35398 523 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 OR1D4P47884 311 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TPM4P67936 248 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TRDNQ13061 729 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 LTBP1Q14766 1721 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ABRAXAS2Q15018 415 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ARL6IP1Q15041 203 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ARHGAP31Q2M1Z3 1444 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TMEM30BQ3MIR4 351 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SOHLH1Q5JUK2 328 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 C6orf183Q5T699 404 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ASCL5Q7RTU5 278 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 MRPL21Q7Z2W9 205 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 LRRC49Q8IUZ0 686 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ARHGAP18Q8N392 663 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SVOPLQ8N434 492 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 EID2Q8N6I1 236 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 LRRC75AQ8NAA5 344 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF248Q8NDW4 579 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 FBXO36Q8NEA4 188 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 OR56B4Q8NH76 319 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SLC7A13Q8TCU3 470 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SETD7Q8WTS6 366 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TFB1MQ8WVM0 346 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TMEM190Q8WZ59 177 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 NAT6Q93015 286 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 FAM131CQ96AQ9 280 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 ZBED3Q96IU2 234 aaPredicted RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 C9orf72Q96LT7 481 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 CSPG4P5Q96PW8 444 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 OR8B4Q96RC9 309 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 MCRIP2Q9BUT9 160 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 TMEM59Q9BXS4 323 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 UCK2Q9BZX2 261 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 NMUR2Q9GZQ4 415 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 OR51M1Q9H341 326 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PIGUQ9H490 435 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 KIAA1551Q9HCM1 1747 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 DMAP1Q9NPF5 467 aaPredicted RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 SENP1Q9P0U3 644 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 DDX19BQ9UMR2 479 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 LRRC37A3O60309 1634 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PHRF1Q9P1Y6 1649 aaKnown RBP3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PXDNLA1KZ92 1463 aa3.4□□□□□ -1.87
SCAF11-210ENST00000547654 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 BRCA1P38398 1863 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RANBP2P49792 3224 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 C10orf71Q711Q0 1435 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LAMA2P24043 3122 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 IGLV4-3A0A075B6K6 122 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 TRAV6A0A075B6T7 132 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RAB19A4D1S5 217 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 CENPXA8MT69 81 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LOC110117498-PIK3R3F6TDL0 507 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GFYI3L273 518 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 CDC7O00311 574 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 EEDO75530 441 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SCRG1O75711 98 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FARS2O95363 451 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 AZU1P20160 251 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LMO2P25791 158 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GABRR2P28476 465 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 ADORA2BP29275 332 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SHMT2P34897 504 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GCKP35557 465 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 DDOSTP39656 456 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 NPBWR2P48146 333 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GSSP48637 474 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GPM6AP51674 278 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FBXW4P57775 412 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 PSMC5P62195 406 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LCN2P80188 198 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF33AQ06730 810 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 CALCOCO2Q13137 446 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms