RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PITPNBP48739 271 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 RPL22L1Q6P5R6 122 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 RFT1Q96AA3 541 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 NEK6Q9HC98 313 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 PLSCR3Q9NRY6 295 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 LY6G6EA0A0G2JKS1 128 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 OR6C70A6NIJ9 312 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-209ENST00000547018 ZNF823P16415 610 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 HTR3AP46098 478 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 BIDP55957 195 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-209ENST00000547018 GALK2Q01415 458 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 PLA2G7Q13093 441 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 ZFP69Q49AA0 526 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 ATAD3CQ5T2N8 411 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 STPG1Q5TH74 334 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 OR10K2Q6IF99 312 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 MZT2BQ6NZ67 158 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 UBL7Q96S82 380 aaPredicted RBP11.46□□□□□ -0.57
SCAF11-209ENST00000547018 RAB33BQ9H082 229 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 PCED1AQ9H1Q7 454 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 PPP1R3EQ9H7J1 279 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 RNF121Q9H920 327 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.57
SCAF11-209ENST00000547018 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 U3KQA8 63 aa11.46□□□□□ -0.57
SCAF11-209ENST00000547018 ROS1P08922 2347 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 TRAV8-7A0A075B6U6 113 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 IGKV1D-43A0A0B4J1Z2 117 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 VSTM2BA6NLU5 285 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 SEC14L5O43304 696 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 FADS1O60427 444 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 ITGA10O75578 1167 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 TACSTD2P09758 323 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 NAT2P11245 290 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 GIFP27352 417 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 DCAF7P61962 342 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 RPS4XP62701 263 aaKnown RBP11.46□□□□□ -0.58
SCAF11-209ENST00000547018 OC90Q02509 493 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-209ENST00000547018 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.586e-13■■■□□ 14.9
SCAF11-209ENST00000547018 OVCH1Q7RTY7 1134 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 GRINAQ7Z429 371 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-209ENST00000547018 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-209ENST00000547018 SPSB2Q99619 263 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 MED18Q9BUE0 208 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 ZNF160Q9HCG1 818 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 MYOTQ9UBF9 498 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 B9D1Q9UPM9 204 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 EMC9Q9Y3B6 208 aa11.46□□□□□ -0.58
SCAF11-209ENST00000547018 PRSS37A4D1T9 235 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 RAMP1O60894 148 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 ZFAND5O76080 213 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 BGLAPP02818 100 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PRSS12P56730 875 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 RPL27P61353 136 aaKnown RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 RPS11P62280 158 aaKnown RBP eCLIP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 C1orf210Q8IVY1 113 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 TOMM5Q8N4H5 51 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 FAM71CQ8NEG0 241 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 KLHL15Q96M94 604 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 TMEM43Q9BTV4 400 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 ADAM19Q9H013 955 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 EMC7Q9NPA0 242 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 INPP5EQ9NRR6 644 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 SLC39A1Q9NY26 324 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PISDQ9UG56 409 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 B3GALT1Q9Y5Z6 326 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 FKBP7Q9Y680 259 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 INMT-MINDY4F8WBC2 141 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 ZNHIT1O43257 154 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 IDH3BO43837 385 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 GNALP38405 381 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 SLC26A5P58743 744 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 GPR176Q14439 515 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 NTRK2Q16620 822 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 CDONQ4KMG0 1287 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 RAET1LQ5VY80 246 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 B3GNTL1Q67FW5 361 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 SLC16A9Q7RTY1 509 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 OR51D1Q8NGF3 324 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 WDFY2Q96P53 400 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PAQR5Q9NXK6 330 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 KLK11Q9UBX7 282 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PCDHGB2Q9Y5G2 931 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 A0A0B4J293 547 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 PNPP00491 289 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 SERPINA3P01011 423 aa11.45□□□□□ -0.58
SCAF11-209ENST00000547018 UQCRC1P31930 480 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms