RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SLC16A12Q6ZSM3 486 aa17.34■□□□□ 0.37
SKP2-208ENST00000546211 NOXO1Q8NFA2 376 aa17.34■□□□□ 0.37
SKP2-208ENST00000546211 OR9K2Q8NGE7 335 aa17.34■□□□□ 0.37
SKP2-208ENST00000546211 SMAP2Q8WU79 429 aaPredicted RBP17.34■□□□□ 0.37
SKP2-208ENST00000546211 MYCBPQ99417 103 aaPredicted RBP17.34■□□□□ 0.37
SKP2-208ENST00000546211 DEFB127Q9H1M4 99 aa17.34■□□□□ 0.37
SKP2-208ENST00000546211 TVP23AA6NH52 213 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 TFECO14948 347 aaPredicted RBP17.33■□□□□ 0.37
SKP2-208ENST00000546211 AKAP8O43823 692 aaKnown RBP17.33■□□□□ 0.37
SKP2-208ENST00000546211 HLA-DQA2P01906 255 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 ZNF708P17019 499 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 CLDN18P56856 261 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 RPS3AP61247 264 aaKnown RBP17.33■□□□□ 0.37
SKP2-208ENST00000546211 PMP22Q01453 160 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 HSF2Q03933 536 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 CAMK2DQ13557 499 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 SLC17A1Q14916 467 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 CREB3L2Q70SY1 520 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 TIGD4Q8IY51 512 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 ZNF485Q8NCK3 441 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 NEIL3Q8TAT5 605 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 FNDC8Q8TC99 324 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 INTS14Q96SY0 518 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 MRPL13Q9BYD1 178 aaKnown RBP17.33■□□□□ 0.37
SKP2-208ENST00000546211 ZDHHC11Q9H8X9 412 aa17.33■□□□□ 0.37
SKP2-208ENST00000546211 PAQR5Q9NXK6 330 aaPredicted RBP17.33■□□□□ 0.37
SKP2-208ENST00000546211 TRGV5A0A0B4J1U4 118 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 CENPBD1B2RD01 187 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ZNF670-ZNF695F2Z2N8 137 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 KHDRBS3O75525 346 aaKnown RBP17.32■□□□□ 0.36
SKP2-208ENST00000546211 MT-ND5P03915 603 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 PGA4P0DJD7 388 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 PGA3P0DJD8 388 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ZNF24P17028 368 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 NR4A1P22736 598 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 CAPZA2P47755 286 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 HCCSP53701 268 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ACTA2P62736 377 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ACTG2P63267 376 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 GLO1Q04760 184 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 SRYQ05066 204 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 FMODQ06828 376 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ACSM1Q08AH1 577 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 RNFT1Q5M7Z0 435 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 THEM4Q5T1C6 240 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 WDFY1Q8IWB7 410 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 OR6N2Q8NGY6 317 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 UFD1Q92890 307 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 MNTQ99583 582 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 YIPF3Q9GZM5 350 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 MARCH7Q9H992 704 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 MKRN2OSH3BPM6 223 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ITGB2P05107 769 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 NR2C1P13056 603 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 CPEP16870 476 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 GADD45AP24522 165 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ZNF169Q14929 603 aaPredicted RBP17.32■□□□□ 0.36
SKP2-208ENST00000546211 ETFDHQ16134 617 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 SSX1Q16384 188 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 CTF1Q16619 201 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 TIMM50Q3ZCQ8 353 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 VASNQ6EMK4 673 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 KLBQ86Z14 1044 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 SNX33Q8WV41 574 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 ISG20L2Q9H9L3 353 aaKnown RBP17.32■□□□□ 0.36
SKP2-208ENST00000546211 BABAM2Q9NXR7 383 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 PTTG2Q9NZH5 202 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 COA3Q9Y2R0 106 aaPredicted RBP17.32■□□□□ 0.36
SKP2-208ENST00000546211 LIPGQ9Y5X9 500 aa17.32■□□□□ 0.36
SKP2-208ENST00000546211 J3QLW9 94 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 AIREO43918 545 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ATE1O95260 518 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 GPANK1O95872 356 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ZNF19P17023 458 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ID4P47928 161 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 BDH1Q02338 343 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 TPBGQ13641 420 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 LIPKQ5VXJ0 399 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 CARD17Q5XLA6 110 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ABLIM2Q6H8Q1 611 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 LRRC69Q6ZNQ3 347 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 FCRLAQ7L513 359 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 SSX6Q7RTT6 188 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 CDC20BQ86Y33 519 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ALDH16A1Q8IZ83 802 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ROBO4Q8WZ75 1007 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 ZNF845Q96IR2 970 aaPredicted RBP17.31■□□□□ 0.36
SKP2-208ENST00000546211 C4orf36Q96KX1 117 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 WDR76Q9H967 626 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 TRIM36Q9NQ86 728 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 NDUFB11Q9NX14 153 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 COPS3Q9UNS2 423 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 TMEM14AQ9Y6G1 99 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 FREM3P0C091 2139 aa17.31■□□□□ 0.36
SKP2-208ENST00000546211 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
SKP2-208ENST00000546211 K7ENP7 123 aa17.3■□□□□ 0.36
SKP2-208ENST00000546211 SYNGR4O95473 234 aa17.3■□□□□ 0.36
SKP2-208ENST00000546211 INO80CQ6PI98 192 aaPredicted RBP17.3■□□□□ 0.36
SKP2-208ENST00000546211 C19orf48Q6RUI8 117 aa17.3■□□□□ 0.36
SKP2-208ENST00000546211 PHC2Q8IXK0 858 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms